RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SLMAPQ14BN4 828 aa19.4■□□□□ 0.7
COL5A3-201ENST00000264828 ELAC2Q9BQ52 826 aaKnown RBP19.4■□□□□ 0.7
COL5A3-201ENST00000264828 ACTR5Q9H9F9 607 aaPredicted RBP19.4■□□□□ 0.7
COL5A3-201ENST00000264828 ASPRV1Q53RT3 343 aa19.39■□□□□ 0.7
COL5A3-201ENST00000264828 PACSIN2Q9UNF0 486 aaPredicted RBP19.39■□□□□ 0.7
COL5A3-201ENST00000264828 PTPREP23469 700 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 ARL4AP40617 200 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 ALS2CLQ60I27 953 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 TOGARAM2Q6ZUX3 1019 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 GOLGA8IPA6NC78 632 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 GOLGA8JA6NMD2 632 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 GRAMD1BQ3KR37 738 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 RMDN2Q96LZ7 410 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 XPAP23025 273 aaPredicted RBP19.39■□□□□ 0.69
COL5A3-201ENST00000264828 FKBP3Q00688 224 aaKnown RBP19.39■□□□□ 0.69
COL5A3-201ENST00000264828 PDE8BO95263 885 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 SKIP12755 728 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 EXOC4Q96A65 974 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 CEP170P1Q96L14 293 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 EMILIN3Q9NT22 766 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 UBN2Q6ZU65 1347 aa19.39■□□□□ 0.69
COL5A3-201ENST00000264828 SRGAP2O75044 1071 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 TADA3O75528 432 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 HABP4Q5JVS0 413 aaKnown RBP19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 TET3O43151 1660 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 TTLL1O95922 423 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ATP1A3P13637 1013 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 MIS18BP1Q6P0N0 1132 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 LCORLQ8N3X6 602 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 PRAMEF22A3QJZ6 481 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 NUGGCQ68CJ6 796 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 TRIM67Q6ZTA4 783 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ARHGAP27Q6ZUM4 889 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 AIFM3Q96NN9 605 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 STAP2Q9UGK3 403 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 TRPC5Q9UL62 973 aaPredicted RBP19.38■□□□□ 0.69
COL5A3-201ENST00000264828 CCDC151A5D8V7 595 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 CDO1Q16878 200 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 GSPT2Q8IYD1 628 aaKnown RBP19.38■□□□□ 0.69
COL5A3-201ENST00000264828 SCHIP1Q9P0W5 487 aaPredicted RBP19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ARPP19P56211 112 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ZBED6P86452 979 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ZBTB17Q13105 803 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 BBS5Q8N3I7 341 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 ATP6V0A1Q93050 837 aa19.38■□□□□ 0.69
COL5A3-201ENST00000264828 MRPL47Q9HD33 250 aaKnown RBP19.38■□□□□ 0.69
COL5A3-201ENST00000264828 SH2B2O14492 632 aaPredicted RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 CA4P22748 312 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 SNAP25P60880 206 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 SLC4A7Q9Y6M7 1214 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 A0A0G2JND7 137 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PRPSAP2O60256 369 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 HNRNPH2P55795 449 aaKnown RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 SLC7A3Q8WY07 619 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 YWHAHQ04917 246 aaPredicted RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PI16Q6UXB8 463 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 SULF1Q8IWU6 871 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 MB21D1Q8N884 522 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 FBXL13Q8NEE6 735 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PUS7LQ9H0K6 701 aaKnown RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 TTI1O43156 1089 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 DCAF15Q66K64 600 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PYROXD1Q8WU10 500 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 ALKBH8Q96BT7 664 aaKnown RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 NUDCD1Q96RS6 583 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 TUBB6Q9BUF5 446 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 ATP10DQ9P241 1426 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 H0Y3Z8 333 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PLA2G4BP0C869 781 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 SLC17A8Q8NDX2 589 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 ENOX1Q8TC92 643 aaKnown RBP19.37■□□□□ 0.69
COL5A3-201ENST00000264828 CEP19Q96LK0 163 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 PANX2Q96RD6 677 aa19.37■□□□□ 0.69
COL5A3-201ENST00000264828 MED7O43513 233 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 CIAO1O76071 339 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 PCP11498 1178 aaKnown RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 MTERF2Q49AM1 385 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 ATG16L1Q676U5 607 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 IGSF1Q8N6C5 1336 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 MAPK13O15264 365 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 PDCLQ13371 301 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 SPDYE1Q8NFV5 336 aaPredicted RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 TTC17Q96AE7 1141 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 FGGP02679 453 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 PNMA6AP0CW24 399 aaPredicted RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 SOX5P35711 763 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 TMEM206Q9H813 350 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 XDHP47989 1333 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 RESTQ13127 1097 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 KRT31Q15323 416 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 ARMC9Q7Z3E5 817 aa19.36■□□□□ 0.69
COL5A3-201ENST00000264828 HEXIM2Q96MH2 286 aaKnown RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 PRDM15P57071 1507 aaPredicted RBP19.36■□□□□ 0.69
COL5A3-201ENST00000264828 ADD2P35612 726 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms