RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SSX2IPQ9Y2D8 614 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 NWD1Q149M9 1564 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 NR3C1P04150 777 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 ATF7P17544 494 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 ELOA2Q8IYF1 753 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 DPF2Q92785 391 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 PIM2Q9P1W9 311 aa18.17■□□□□ 0.5
PHRF1-201ENST00000264555 LIMA1Q9UHB6 759 aaKnown RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
PHRF1-201ENST00000264555 TTC26A0AVF1 554 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 ANO9A1A5B4 782 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 MMS19Q96T76 1030 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 LRRC53A6NM62 1247 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 KNOP1Q1ED39 458 aaKnown RBP18.16■□□□□ 0.5
PHRF1-201ENST00000264555 NAALADL2Q58DX5 795 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 A0A1B0GTH6 734 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 ATF2P15336 505 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 HSPA6P17066 643 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 MAPK4P31152 587 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 ZNF543Q08ER8 600 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 NEK9Q8TD19 979 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 ATP1A2P50993 1020 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 MTMR1Q13613 665 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 CFAP157Q5JU67 520 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 PPM1EQ8WY54 764 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
PHRF1-201ENST00000264555 RASA1P20936 1047 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 FGFR2P21802 821 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 TRIM9Q9C026 710 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 CNTNAP5Q8WYK1 1306 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 PPARDQ03181 441 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 FMR1Q06787 632 aaKnown RBP eCLIP18.15■□□□□ 0.55e-9■■■■■ 37.3
PHRF1-201ENST00000264555 VPS41P49754 854 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 CCNA1P78396 465 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 KCNH2Q12809 1159 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 RASA3Q14644 834 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 MTERF2Q49AM1 385 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 HESX1Q9UBX0 185 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 POTEIP0CG38 1075 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 LMNB2Q03252 620 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 KRT81Q14533 505 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 POTEGQ6S5H5 508 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 POTEEQ6S8J3 1075 aa18.15■□□□□ 0.5
PHRF1-201ENST00000264555 RNF8O76064 485 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 STRIP1Q5VSL9 837 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.14■□□□□ 0.492e-6■■■■■ 34.4
PHRF1-201ENST00000264555 SEL1LQ9UBV2 794 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 THAP12O43422 761 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 OSBPP22059 807 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 PEX3P56589 373 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 CCZ1BP86790 482 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 CCZ1P86791 482 aaPredicted RBP18.14■□□□□ 0.49
PHRF1-201ENST00000264555 DYDC2Q96IM9 177 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 FCER1AP12319 257 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 PHBP35232 272 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 IGBP1P78318 339 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 BFSP1Q12934 665 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 ADSSL1Q8N142 457 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 BCAS4Q8TDM0 211 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 ANKRD36BP1Q96IX9 119 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 RMDN3Q96TC7 470 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 STXBP3O00186 592 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 GTF2A1P52655 376 aaPredicted RBP18.14■□□□□ 0.49
PHRF1-201ENST00000264555 PADI6Q6TGC4 694 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 HHIPL2Q6UWX4 724 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 ABCB6Q9NP58 842 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 ZNF148Q9UQR1 794 aa18.14■□□□□ 0.49
PHRF1-201ENST00000264555 SMARCA1P28370 1054 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 STX2P32856 288 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 PDXDC2PQ6P474 469 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 SPATS2Q86XZ4 545 aaKnown RBP18.13■□□□□ 0.49
PHRF1-201ENST00000264555 PALM2Q8IXS6 379 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 CAPN11Q9UMQ6 739 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 RNF40O75150 1001 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 TROAPQ12815 778 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 PNMA6AP0CW24 399 aaPredicted RBP18.13■□□□□ 0.49
PHRF1-201ENST00000264555 CASP8Q14790 479 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 TAF12Q16514 161 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 ANKRD40Q6AI12 368 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 AGXT2Q9BYV1 514 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 MRPL47Q9HD33 250 aaKnown RBP18.13■□□□□ 0.49
PHRF1-201ENST00000264555 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.13■□□□□ 0.498e-7■■■□□ 17.4
PHRF1-201ENST00000264555 DNAJC12Q9UKB3 198 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 WDR64B1ANS9 1081 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 INO80B-WBP1J3KQ70 363 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 SLC10A5Q5PT55 438 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 SCYL2Q6P3W7 929 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 RHOT2Q8IXI1 618 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 C7orf25Q9BPX7 421 aa18.13■□□□□ 0.49
PHRF1-201ENST00000264555 INO80BQ9C086 356 aaPredicted RBP18.13■□□□□ 0.49
PHRF1-201ENST00000264555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
PHRF1-201ENST00000264555 EIF3CLB5ME19 914 aaKnown RBP18.12■□□□□ 0.49
PHRF1-201ENST00000264555 RHOBTB3O94955 611 aa18.12■□□□□ 0.49
PHRF1-201ENST00000264555 STAT3P40763 770 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms