RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 LGR5O75473 907 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 CABYRO75952 493 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 DDIT3P35638 169 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 RTP1P59025 263 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 IL17AQ16552 155 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 SMAP1Q8IYB5 467 aaPredicted RBP20.65■□□□□ 0.9
SDF4-201ENST00000263741 BANK1Q8NDB2 785 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 GABBR1Q9UBS5 961 aa20.65■□□□□ 0.9
SDF4-201ENST00000263741 ATP2C1P98194 919 aaPredicted RBP20.64■□□□□ 0.89
SDF4-201ENST00000263741 AZI2Q9H6S1 392 aa20.64■□□□□ 0.89
SDF4-201ENST00000263741 ZNF302Q9NR11 478 aa20.64■□□□□ 0.89
SDF4-201ENST00000263741 IGKV6D-21A0A0A0MT36 114 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 HAS3O00219 553 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 PSAPP07602 524 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 STAT5BP51692 787 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 JAK3P52333 1124 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 HIC1Q14526 733 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 TFIP11Q9UBB9 837 aaKnown RBP20.63■□□□□ 0.89
SDF4-201ENST00000263741 HDAC6Q9UBN7 1215 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 ZNF215Q9UL58 517 aaPredicted RBP20.63■□□□□ 0.89
SDF4-201ENST00000263741 RBAK-RBAKDNI3L0D1 243 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 ARVCFO00192 962 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 CYP4A11Q02928 519 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 SNX17Q15036 470 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 PDXDC2PQ6P474 469 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 SMARCAD1Q9H4L7 1026 aa20.63■□□□□ 0.89
SDF4-201ENST00000263741 TRMT13Q9NUP7 481 aaKnown RBP20.63■□□□□ 0.89
SDF4-201ENST00000263741 IGSF9BQ9UPX0 1349 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 SFNP31947 248 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 ERAP1Q9NZ08 941 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 RGL1Q9NZL6 768 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 PP2D1A8MPX8 630 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 ZNF862O60290 1169 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 ATP4AP20648 1035 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 TLE2Q04725 743 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 FAM160B1Q5W0V3 765 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 C7orf31Q8N865 590 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 TRPV6Q9H1D0 765 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 WRAP73Q9P2S5 460 aaPredicted RBP20.62■□□□□ 0.89
SDF4-201ENST00000263741 TRPC6Q9Y210 931 aa20.62■□□□□ 0.89
SDF4-201ENST00000263741 TMEM150BA6NC51 233 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 SMIM10L2AP0DMW4 78 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 SMIM10L2BP0DMW5 78 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
SDF4-201ENST00000263741 DNM1Q05193 864 aaKnown RBP20.61■□□□□ 0.89
SDF4-201ENST00000263741 GRIN1Q05586 938 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 PLCB4Q15147 1175 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 PTPAQ15257 358 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
SDF4-201ENST00000263741 C7orf61Q8IZ16 206 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 SLC43A3Q8NBI5 491 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 ZBTB10Q96DT7 871 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 DYDC2Q96IM9 177 aa20.61■□□□□ 0.89
SDF4-201ENST00000263741 VWA3AA6NCI4 1184 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 B4GALT4O60513 344 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 MARCKSP29966 332 aaPredicted RBP20.6■□□□□ 0.89
SDF4-201ENST00000263741 CDC25AP30304 524 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 CDK7P50613 346 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 PRKCEQ02156 737 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 CTTNQ14247 550 aaKnown RBP20.6■□□□□ 0.89
SDF4-201ENST00000263741 CKAP2LQ8IYA6 745 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 TRAPPC12Q8WVT3 735 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 PDIA4P13667 645 aaKnown RBP20.6■□□□□ 0.89
SDF4-201ENST00000263741 IGBP1P78318 339 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 TMEM266Q2M3C6 531 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 NFRKBQ6P4R8 1299 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 FAM126BQ8IXS8 530 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 DPF3Q92784 378 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 HTATIP2Q9BUP3 242 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 SETD4Q9NVD3 440 aa20.6■□□□□ 0.89
SDF4-201ENST00000263741 MAFBQ9Y5Q3 323 aaPredicted RBP20.6■□□□□ 0.89
SDF4-201ENST00000263741 LAD1O00515 517 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 RGS19P49795 217 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 FXR2P51116 673 aaKnown RBP eCLIP20.59■□□□□ 0.89
SDF4-201ENST00000263741 DTHD1Q6ZMT9 781 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 PLPPR4Q7Z2D5 763 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 RDM1Q8NG50 284 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 EIF2AK1Q9BQI3 630 aaKnown RBP20.59■□□□□ 0.89
SDF4-201ENST00000263741 SH2D3AQ9BRG2 576 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 LXNQ9BS40 222 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 LOXHD1Q8IVV2 1947 aa20.59■□□□□ 0.89
SDF4-201ENST00000263741 EPHA7Q15375 998 aa20.58■□□□□ 0.89
SDF4-201ENST00000263741 LMBR1Q8WVP7 490 aa20.58■□□□□ 0.89
SDF4-201ENST00000263741 A0A087WWV3 80 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 POTEB3A0JP26 581 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 PRPHP41219 470 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 PPFIA1Q13136 1202 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 SCN5AQ14524 2016 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 POTEBQ6S5H4 581 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 SH3RF1Q7Z6J0 888 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 CTAGE1Q96RT6 745 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 PRDM5Q9NQX1 630 aaPredicted RBP20.58■□□□□ 0.88
SDF4-201ENST00000263741 CEP131Q9UPN4 1083 aa20.58■□□□□ 0.88
SDF4-201ENST00000263741 SIP14410 1827 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms