RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 PTK2Q05397 1052 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 CALCOCO2Q13137 446 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 SETDB1Q15047 1291 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 UAP1Q16222 522 aaPredicted RBP17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 USP17L2Q6R6M4 530 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 RAB34Q9BZG1 259 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 GPCPD1Q9NPB8 672 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 MSH2P43246 934 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 KCNJ1P48048 391 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 PLCB4Q15147 1175 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 ERGIC2Q96RQ1 377 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 RASAL2Q9UJF2 1139 aa17.3■□□□□ 0.36
PRPF40B-201ENST00000261897 GNAT1P11488 350 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 NLRP10Q86W26 655 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 COA7Q96BR5 231 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 TRIM4Q9C037 500 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 C6orf50Q9HD87 102 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 RNF14Q9UBS8 474 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 WDR91A4D1P6 747 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 KLRF2D3W0D1 207 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 CETN3O15182 167 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 PDE8AO60658 829 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 NR2F2P24468 414 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 PMS2P54278 862 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 YTHDF3Q7Z739 585 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 FBXO25Q8TCJ0 367 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 RAB17Q9H0T7 212 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 NKIRAS1Q9NYS0 192 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 MEIS1O00470 390 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 FKBP3Q00688 224 aaKnown RBP17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 PFKFB3Q16875 520 aaPredicted RBP17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 AADACL2Q6P093 401 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 MTFR1LQ9H019 292 aa17.29■□□□□ 0.36
PRPF40B-201ENST00000261897 GBP1P32455 592 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 HSPA9P38646 679 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 MESDQ14696 234 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 ARL6IP4Q66PJ3 421 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 SLC30A9Q6PML9 568 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 EGFL6Q8IUX8 553 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 SRRM1Q8IYB3 904 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 DTX3LQ8TDB6 740 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 TMEM237Q96Q45 408 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 KLRC4O43908 158 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 DRD4P21917 467 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 FECHP22830 423 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 ZBTB16Q05516 673 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 NAB2Q15742 525 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 SLC18A3Q16572 532 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 TBC1D10BQ4KMP7 808 aaPredicted RBP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 SEMA4AQ9H3S1 761 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 HOMER3Q9NSC5 361 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 DLGAP2Q9P1A6 1054 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 CNTNAP5Q8WYK1 1306 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 CCDC160A6NGH7 325 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 SPOPO43791 374 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 ORC4O43929 436 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 NQO1P15559 274 aaKnown RBP17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 TRAPPC10P48553 1259 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 NEK8Q86SG6 692 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 GLYCTKQ8IVS8 523 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 OSGEPQ9NPF4 335 aa17.28■□□□□ 0.36
PRPF40B-201ENST00000261897 C21orf2O43822 256 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 A1CFQ9NQ94 594 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 SFI1A8K8P3 1242 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 YY1P25490 414 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 EXOC3L4Q17RC7 722 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 RASIP1Q5U651 963 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 TAOK1Q7L7X3 1001 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 CNOT10Q9H9A5 744 aaKnown RBP17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 KIAA1024Q9UPX6 916 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 NIP7Q9Y221 180 aaKnown RBP eCLIP17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
PRPF40B-201ENST00000261897 KRT16P08779 473 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 KCNH2Q12809 1159 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ZNF746Q6NUN9 644 aaPredicted RBP17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ARMC9Q7Z3E5 817 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 GPBP1Q86WP2 473 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 CCT6BQ92526 530 aa17.27■□□□□ 0.35
PRPF40B-201ENST00000261897 ADAMTS13Q76LX8 1427 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 WDR17Q8IZU2 1322 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 TCRBV5S4A2TA0A5A2 114 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 F8VZ95 297 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 TDP2O95551 362 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 PDE6CP51160 858 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 CYP4A11Q02928 519 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 SEC23AQ15436 765 aa17.26■□□□□ 0.35
PRPF40B-201ENST00000261897 ZC3H18Q86VM9 953 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms