RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DDRGK1Q96HY6 314 aa6.46□□□□□ -1.37
TOPBP1-201ENST00000260810 AGPAT5Q9NUQ2 364 aa6.46□□□□□ -1.37
TOPBP1-201ENST00000260810 ZHX2Q9Y6X8 837 aa6.46□□□□□ -1.37
TOPBP1-201ENST00000260810 MXRA5Q9NR99 2828 aa6.46□□□□□ -1.37
TOPBP1-201ENST00000260810 SMPD1P17405 629 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 ATG14Q6ZNE5 492 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 FAM53CQ9NYF3 392 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 DDX41Q9UJV9 622 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 GPR32O75388 356 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 MGAT3Q09327 533 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 DZIP1Q86YF9 867 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 PRO3102Q9H379 93 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 SH3GLB2Q9NR46 395 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 STX8Q9UNK0 236 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 TTC28Q96AY4 2481 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 TRIM75PA6NK02 468 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 UBA1P22314 1058 aaKnown RBP6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 TDO2P48775 406 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 RARRES1P49788 294 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 ICA1Q05084 483 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 XYLT2Q9H1B5 865 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 DISC1Q9NRI5 854 aa6.46□□□□□ -1.38
TOPBP1-201ENST00000260810 MYBP10242 640 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 DCAF12L1Q5VU92 463 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 RINT1Q6NUQ1 792 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PIWIL1Q96J94 861 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PAAF1Q9BRP4 392 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ELP3Q9H9T3 547 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ANKFY1Q9P2R3 1169 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 STYXL1Q9Y6J8 313 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 NUP210Q8TEM1 1887 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PPEF2O14830 753 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 POLR2DO15514 142 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 CSDE1O75534 798 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 DEXIO95424 95 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 CDK7P50613 346 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 JAM2P57087 298 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ADCY2Q08462 1091 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 UBXN11Q5T124 520 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 SLFN13Q68D06 897 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 SDCBP2Q9H190 292 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 DHX33Q9H6R0 707 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 TLL2Q9Y6L7 1015 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 RHOBTB3O94955 611 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ECHS1P30084 290 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 RUFY4Q6ZNE9 571 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 IRF2BP2Q7Z5L9 587 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 SLC43A3Q8NBI5 491 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 POMGNT1Q8WZA1 660 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PLIN2Q99541 437 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 DHX36Q9H2U1 1008 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 MRPL44Q9H9J2 332 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 APOBEC3GQ9HC16 384 aaKnown RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 FANCLQ9NW38 375 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ZNF446Q9NWS9 450 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 SIX4Q9UIU6 781 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ABCB11O95342 1321 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 SMCO2A6NFE2 343 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 HOXC6P09630 235 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ZSCAN20P17040 1043 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 UBE2HP62256 183 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PRKG1Q13976 671 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 BAATQ14032 418 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 RNF169Q8NCN4 708 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 WHAMMQ8TF30 809 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ESR2Q92731 530 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 ZBTB45Q96K62 511 aaPredicted RBP6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 CHP1Q99653 195 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 GANQ9H2C0 597 aa6.45□□□□□ -1.38
TOPBP1-201ENST00000260810 PFKMP08237 780 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 CACNA2D1P54289 1103 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 EPHB4P54760 987 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 CAMK1Q14012 370 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 BMT2Q1RMZ1 405 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ARHGAP27Q6ZUM4 889 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ZNF280CQ8ND82 737 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PKMYT1Q99640 499 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 GPR20Q99678 358 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ADAMTS10Q9H324 1103 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 SFI1A8K8P3 1242 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 RNF103O00237 685 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 BACH1O14867 736 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PTMSP20962 102 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PRPHP41219 470 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 HERVK_113P62684 666 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PPP3CAQ08209 521 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 PLA2G4FQ68DD2 849 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 BNIPLQ7Z465 357 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 SLC30A5Q8TAD4 765 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 SENP7Q9BQF6 1050 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 WDR83Q9BRX9 315 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 KCND1Q9NSA2 647 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 ADAMTS20P59510 1910 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 MBLAC1A4D2B0 266 aaPredicted RBP6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 HIP1O00291 1037 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 TCF4P15884 667 aa6.44□□□□□ -1.38
TOPBP1-201ENST00000260810 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms