RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 ADCY8P40145 1251 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 PPP2R2AP63151 447 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 DPYDQ12882 1025 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 PSMD6Q15008 389 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 TRAPPC11Q7Z392 1133 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 NEK8Q86SG6 692 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 ZC3H12CQ9C0D7 883 aaKnown RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 EXOC3O60645 756 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 HERVK_113P62684 666 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 KAZNQ674X7 775 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 CYB5D1Q6P9G0 228 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 CNPY4Q8N129 248 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 SEC16BQ96JE7 1060 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 SMC6Q96SB8 1091 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 G3BP2Q9UN86 482 aaKnown RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 SART1O43290 800 aaKnown RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 MSH2P43246 934 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 ZNF804AQ7Z570 1209 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 DHTKD1Q96HY7 919 aaPredicted RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 GBP5Q96PP8 586 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 ACTR5Q9H9F9 607 aaPredicted RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 DBR1Q9UK59 544 aaKnown RBP16.15■□□□□ 0.18
KCTD3-201ENST00000259154 SLC16A2P36021 539 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 CCDC174Q6PII3 467 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 NSMFQ6X4W1 530 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 PTF1AQ7RTS3 328 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 HIPK4Q8NE63 616 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 BICD1Q96G01 975 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 KIF9Q9HAQ2 790 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 USP21Q9UK80 565 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 CAPN11Q9UMQ6 739 aa16.14■□□□□ 0.18
KCTD3-201ENST00000259154 RASGRF2O14827 1237 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 OPLAHO14841 1288 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 OPHN1O60890 802 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 FGFR4P22455 802 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 WHAMMQ8TF30 809 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 PLVAPQ9BX97 442 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 TRIM4Q9C037 500 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 TMOD4Q9NZQ9 345 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 ACTN1P12814 892 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 RCN2Q14257 317 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 PTGISQ16647 500 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 UBE2SQ16763 222 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 ZNF746Q6NUN9 644 aaPredicted RBP16.14■□□□□ 0.17
KCTD3-201ENST00000259154 CCDC127Q96BQ5 260 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 PSMD1Q99460 953 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 ETNK1Q9HBU6 452 aa16.14■□□□□ 0.17
KCTD3-201ENST00000259154 NOP53Q9NZM5 478 aaKnown RBP16.14■□□□□ 0.17
KCTD3-201ENST00000259154 ZNF18P17022 549 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 SRRM1Q8IYB3 904 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 STAG2Q8N3U4 1231 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 UBL4BQ8N7F7 174 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 ERMNQ8TAM6 284 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 NEK9Q8TD19 979 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 VIPAS39Q9H9C1 493 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 COL4A1P02462 1669 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 SLIT2O94813 1529 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 ANO9A1A5B4 782 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 LGR5O75473 907 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 KLRC1P26715 233 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 FKBP3Q00688 224 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 SLC20A2Q08357 652 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TRIM28Q13263 835 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TRADDQ15628 312 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 ZYXQ15942 572 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TPH2Q8IWU9 490 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 KAT2BQ92831 832 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 CEP63Q96MT8 703 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 MED15Q96RN5 788 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 OSBPL1AQ9BXW6 950 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 RAB21Q9UL25 225 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TAF1P21675 1872 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 ANKRD20A3Q5VUR7 823 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 SLF2Q8IX21 1173 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 PRMT1Q99873 361 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 THAP9Q9H5L6 903 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 PRPF6O94906 941 aaKnown RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 GSTO1P78417 241 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TMED2Q15363 201 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 PRR16Q569H4 304 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TSC22D3Q99576 134 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TMEM60Q9H2L4 133 aa16.13■□□□□ 0.17
KCTD3-201ENST00000259154 TAF1DQ9H5J8 278 aaPredicted RBP16.13■□□□□ 0.17
KCTD3-201ENST00000259154 RCCD1A6NED2 376 aa16.12■□□□□ 0.17
KCTD3-201ENST00000259154 RPL13P26373 211 aaKnown RBP16.12■□□□□ 0.17
KCTD3-201ENST00000259154 NAP1L3Q99457 506 aaPredicted RBP16.12■□□□□ 0.17
KCTD3-201ENST00000259154 FRMD4BQ9Y2L6 1034 aa16.12■□□□□ 0.17
KCTD3-201ENST00000259154 UBXN2AP68543 259 aa16.12■□□□□ 0.17
KCTD3-201ENST00000259154 ITPK1Q13572 414 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms