RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 IRF2BP2Q7Z5L9 587 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 DNAAF5Q86Y56 855 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 MREGQ8N565 214 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 DHX36Q9H2U1 1008 aaKnown RBP18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 POLD4Q9HCU8 107 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 SWAP70Q9UH65 585 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 FAM169AQ9Y6X4 670 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 A0A087WUV0 522 aaPredicted RBP18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 TADA2BQ86TJ2 420 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 TAF4BQ92750 862 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 NAP1L4Q99733 375 aaKnown RBP18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 GOLPH3Q9H4A6 298 aa18.75■□□□□ 0.59
SLC52A1-201ENST00000254853 KCNK3O14649 394 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 RPS6KA1Q15418 735 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 VPS72Q15906 364 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 ANO3Q9BYT9 981 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 FAM107BQ9H098 131 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 TMEM59LQ9UK28 342 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 SAMM50Q9Y512 469 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 RIMBP2O15034 1052 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 MYBP10242 640 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 PSMC6P62333 389 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 TNNC1P63316 161 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 SF3B2Q13435 895 aaKnown RBP18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 QRICH1Q2TAL8 776 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 EFCC1Q9HA90 598 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
SLC52A1-201ENST00000254853 PITPNM2Q9BZ72 1349 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 BTNL10A8MVZ5 291 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 RAD21O60216 631 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 BBOX1O75936 387 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 UCHL3P15374 230 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 HOXD13P35453 343 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 USP11P51784 963 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 GIT2Q14161 759 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 PTPROQ16827 1216 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 WHAMMQ8TF30 809 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 RNPC3Q96LT9 517 aaKnown RBP18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 C8orf37Q96NL8 207 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 SPAG5Q96R06 1193 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 PCDHA1Q9Y5I3 950 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 ATAD5Q96QE3 1844 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 MEIS1O00470 390 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CLSTN1O94985 981 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 KIF4AO95239 1232 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CPP00450 1065 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 KDM7AQ6ZMT4 941 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 FRMD5Q7Z6J6 570 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 SFR1Q86XK3 245 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CATSPER3Q86XQ3 398 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CD302Q8IX05 232 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 MXD3Q9BW11 206 aa18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
SLC52A1-201ENST00000254853 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 AFPP02771 609 aaKnown RBP18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 SERPINB2P05120 415 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 CYP3A7P24462 503 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 PON1P27169 355 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 PABPC4Q13310 644 aaKnown RBP eCLIP18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 MICALL1Q8N3F8 863 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 MBOAT7Q96N66 472 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 PLCB1Q9NQ66 1216 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 TRAF3IP3Q9Y228 551 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
SLC52A1-201ENST00000254853 A6NNZ2 444 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 SLC26A4O43511 780 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 ZEB2O60315 1214 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 ERVK-9P63128 1117 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 KNOP1Q1ED39 458 aaKnown RBP18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 TUBB8Q3ZCM7 444 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 C10orf76Q5T2E6 689 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 LRRC57Q8N9N7 239 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 RBM46Q8TBY0 533 aaKnown RBP18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 NGLY1Q96IV0 654 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 REEP2Q9BRK0 252 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 NAGPAQ9UK23 515 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 MYO3BQ8WXR4 1341 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 CES2O00748 559 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 NDUFAB1O14561 156 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 CEP104O60308 925 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 LIG3P49916 1009 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 SCNN1DP51172 638 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 GUCY1A3Q02108 690 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 SPIRE1Q08AE8 756 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 EXOC3L4Q17RC7 722 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 C10orf71Q711Q0 1435 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 SLFN12Q8IYM2 578 aa18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 P2RX7Q99572 595 aaKnown RBP18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 TAF1DQ9H5J8 278 aaPredicted RBP18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 AJAP1Q9UKB5 411 aaPredicted RBP18.71■□□□□ 0.59
SLC52A1-201ENST00000254853 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 HSPA9P38646 679 aaKnown RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 PRR16Q569H4 304 aa18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 DCAF17Q5H9S7 520 aaPredicted RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 ALKBH5Q6P6C2 394 aaKnown RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 EPM2AIP1Q7L775 607 aaPredicted RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 PROCA1Q8NCQ7 364 aaPredicted RBP18.7■□□□□ 0.58
SLC52A1-201ENST00000254853 ETNPPLQ8TBG4 499 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms