RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 DCDC2CA8MYV0 355 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 STXBP3O00186 592 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 FLOT1O75955 427 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 FERP16591 822 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 LRRC63Q05C16 580 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 MFN1Q8IWA4 741 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 BLIDQ8IZY5 108 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 LCORLQ8N3X6 602 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 IFT74Q96LB3 600 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.31■■□□□ 1.164e-6■■■■□ 19.3
RARA-201ENST00000254066 ATP8B3O60423 1300 aa22.31■■□□□ 1.16
RARA-201ENST00000254066 KCNK3O14649 394 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 CHN1P15882 459 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 GALNTL6Q49A17 601 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 CCDC178Q5BJE1 867 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 PARD3BQ8TEW8 1205 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 BCL9O00512 1426 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 ASIC1P78348 528 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 EN1Q05925 392 aaPredicted RBP22.3■■□□□ 1.16
RARA-201ENST00000254066 DHX9Q08211 1270 aaKnown RBP22.3■■□□□ 1.16
RARA-201ENST00000254066 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
RARA-201ENST00000254066 ZFATQ9P243 1243 aa22.3■■□□□ 1.16
RARA-201ENST00000254066 UBR2Q8IWV8 1755 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 NCALDP61601 193 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 CMPK2Q5EBM0 449 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 DDX42Q86XP3 938 aaKnown RBP eCLIP22.29■■□□□ 1.16
RARA-201ENST00000254066 EEF2KMTQ96G04 330 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 CCDC169A6NNP5 214 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 CYP27B1O15528 508 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 RARAP10276 462 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 ITGA6P23229 1130 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 PUM3Q15397 648 aaKnown RBP22.29■■□□□ 1.16
RARA-201ENST00000254066 SLC30A9Q6PML9 568 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 RASGEF1CQ8N431 466 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 MKL1Q969V6 931 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 RAB17Q9H0T7 212 aa22.29■■□□□ 1.16
RARA-201ENST00000254066 ATP2A2P16615 1042 aaKnown RBP22.28■■□□□ 1.16
RARA-201ENST00000254066 FLT3P36888 993 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 RAB27AP51159 221 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 ALDH5A1P51649 535 aaPredicted RBP22.28■■□□□ 1.16
RARA-201ENST00000254066 TMC4Q7Z404 712 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 LRRC34Q8IZ02 419 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 SRBD1Q8N5C6 995 aaKnown RBP22.28■■□□□ 1.16
RARA-201ENST00000254066 MDM1Q8TC05 714 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 ZBTB10Q96DT7 871 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 ARHGEF3Q9NR81 526 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 UTP11Q9Y3A2 253 aaKnown RBP22.28■■□□□ 1.16
RARA-201ENST00000254066 DUOX1Q9NRD9 1551 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 ZPR1O75312 459 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 APBA3O96018 575 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 LINGO3P0C6S8 592 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 FGFR2P21802 821 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 PDE6CP51160 858 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 RPS6KA3P51812 740 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 GUF1Q8N442 669 aaKnown RBP22.28■■□□□ 1.16
RARA-201ENST00000254066 KIAA0895Q8NCT3 520 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 TCP11L1Q9NUJ3 509 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 FLT1P17948 1338 aa22.28■■□□□ 1.16
RARA-201ENST00000254066 ENO4A6NNW6 628 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 NKRFO15226 690 aaKnown RBP eCLIP22.27■■□□□ 1.163e-6■■□□□ 12
RARA-201ENST00000254066 DAPK3O43293 454 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 CEP104O60308 925 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 DNA2P51530 1060 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 RNASE9P60153 205 aaKnown RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 PPP2R5EQ16537 467 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 ANKRD20A2Q5SQ80 823 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 C1QTNF12Q5T7M4 302 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 ANKRD20A1Q5TYW2 823 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 ANKRD20A3Q5VUR7 823 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 CABP7Q86V35 215 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PCDHA4Q9UN74 947 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PACSIN2Q9UNF0 486 aaPredicted RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 AGAP1Q9UPQ3 857 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PVALEFA0A1B0GWK0 134 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 E7ENQ6 273 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 TLR2O60603 784 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 OAS1P00973 400 aaKnown RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 FGRP09769 529 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 FCER1AP12319 257 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PLCG1P19174 1290 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 KIF5BP33176 963 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 LACTBP83111 547 aaPredicted RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 ATP11AP98196 1134 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 BNIP1Q12981 228 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 SLC5A9Q2M3M2 681 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 FAM133BQ5BKY9 247 aaKnown RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 RINLQ6ZS11 566 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PROM2Q8N271 834 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 CAMKK2Q96RR4 588 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 ELAC2Q9BQ52 826 aaKnown RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 STMN4Q9H169 189 aaPredicted RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.27■■□□□ 1.16
RARA-201ENST00000254066 INTS9Q9NV88 658 aaKnown RBP22.27■■□□□ 1.16
RARA-201ENST00000254066 NLRP2Q9NX02 1062 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 AIPL1Q9NZN9 384 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 ANKIB1Q9P2G1 1089 aa22.27■■□□□ 1.16
RARA-201ENST00000254066 PP2D1A8MPX8 630 aa22.26■■□□□ 1.15
RARA-201ENST00000254066 CAND2O75155 1236 aa22.26■■□□□ 1.15
RARA-201ENST00000254066 AGTP01019 485 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms