RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 H7C0C1 242 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 SEMA3EO15041 775 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 SERPINB2P05120 415 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 BRAFP15056 766 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 MAP4P27816 1152 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 ATP5OP48047 213 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 PTH1RQ03431 593 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 RAPH1Q70E73 1250 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 EPM2AIP1Q7L775 607 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 CCDC117Q8IWD4 279 aaPredicted RBP14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 RBM17Q96I25 401 aaKnown RBP14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 SLC39A2Q9NP94 309 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 GID8Q9NWU2 228 aa14.15□□□□□ -0.14
PCDHGA3-201ENST00000253812 KRT37O76014 449 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 PAPOLAP51003 745 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 IRAK1P51617 712 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 PDXDC1Q6P996 788 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CENPUQ71F23 418 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 PDIK1LQ8N165 341 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 P2RX5Q93086 422 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 TRIM11Q96F44 468 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 KCNG1Q9UIX4 513 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAN1B1Q9UKM7 699 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CLASP1Q7Z460 1538 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 PRDM1O75626 825 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 SCRN1Q12765 414 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 RINT1Q6NUQ1 792 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 RNF207Q6ZRF8 634 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 TOGARAM2Q6ZUX3 1019 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 PCGF5Q86SE9 256 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 SRRM1Q8IYB3 904 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 USP40Q9NVE5 1235 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 RWDD2AQ9UIY3 292 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 A0A087WWV3 80 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 STAM2O75886 525 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CPP00450 1065 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 SERPING1P05155 500 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 RAB44Q7Z6P3 723 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 GPBP1Q86WP2 473 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 FBXL13Q8NEE6 735 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCDC90BQ9GZT6 254 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 SMYD2Q9NRG4 433 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 TLK1Q9UKI8 766 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAP3K4Q9Y6R4 1608 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 ATP5JP18859 108 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 SERPINB1P30740 379 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 KCNJ6P48051 423 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CYP2J2P51589 502 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 BPIFB4P59827 614 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 CNGA3Q16281 694 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 HP1BP3Q5SSJ5 553 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 TAB3Q8N5C8 712 aaPredicted RBP14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 MCUQ8NE86 351 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.14□□□□□ -0.151e-7■■■■■ 78
PCDHGA3-201ENST00000253812 EYA3Q99504 573 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 C1orf112Q9NSG2 853 aa14.14□□□□□ -0.15
PCDHGA3-201ENST00000253812 USP27XA6NNY8 438 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 PLS3P13797 630 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ADD1P35611 737 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 AOC3Q16853 763 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 SPATA21Q7Z572 469 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 GSPT2Q8IYD1 628 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 TTC17Q96AE7 1141 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 BEGAINQ9BUH8 593 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 TAF1DQ9H5J8 278 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 WBP4O75554 376 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 PGM1P36871 562 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 CARSP49589 748 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 FKBP3Q00688 224 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 PPM1KQ8N3J5 372 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 PRPF38AQ8NAV1 312 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 EEF2KMTQ96G04 330 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 MAML3Q96JK9 1138 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 BTBD6Q96KE9 485 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 MYL1P05976 194 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 TNNI1P19237 187 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 KIF22Q14807 665 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ARMCX6Q7L4S7 300 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 TRIM50Q86XT4 487 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 PYROXD1Q8WU10 500 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 STRIP2Q9ULQ0 834 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 WDR17Q8IZU2 1322 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCDC22O60826 627 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ACADSP16219 412 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 HSPA9P38646 679 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 MRPS25P82663 173 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 CYTH1Q15438 398 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 CCDC144BQ3MJ40 725 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 TMTC4Q5T4D3 741 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ZNF658Q5TYW1 1059 aaPredicted RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 LRRC8BQ6P9F7 803 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 APOA5Q6Q788 366 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 ZNF654Q8IZM8 581 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 DCLK2Q8N568 766 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 POMGNT1Q8WZA1 660 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 SAP30BPQ9UHR5 308 aaKnown RBP14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 DCTN4Q9UJW0 460 aa14.13□□□□□ -0.15
PCDHGA3-201ENST00000253812 CFAP69A5D8W1 941 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms