RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 RAB17Q9H0T7 212 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 STXBP3O00186 592 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 PDHBP11177 359 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 AGBL3Q8NEM8 1001 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 TRIM11Q96F44 468 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 TUBE1Q9UJT0 475 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 POTEMA6NI47 508 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 WDR64B1ANS9 1081 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 DHX40Q8IX18 779 aaKnown RBP17.16■□□□□ 0.34
SIN3B-201ENST00000248054 CXorf56Q9H5V9 222 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 TMEM260Q9NX78 707 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 AGTPBP1Q9UPW5 1226 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 ZNF365Q70YC5 407 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 CCDC151A5D8V7 595 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 FAM196BA6NMK8 535 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 MTMR1Q13613 665 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 FYB2Q5VWT5 728 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 METTL13Q8N6R0 699 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 PARP4Q9UKK3 1724 aaKnown RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 SERPING1P05155 500 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 EIF2AK2P19525 551 aaKnown RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 ATP11AP98196 1134 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 MCPH1Q8NEM0 835 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 WRNIP1Q96S55 665 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 CD19P15391 556 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 GRM1Q13255 1194 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 METTL16Q86W50 562 aaKnown RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 ATF7P17544 494 aaPredicted RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 SURF1Q15526 300 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 BCAS4Q8TDM0 211 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 FAM167AQ96KS9 214 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 EHD4Q9H223 541 aa17.15■□□□□ 0.34
SIN3B-201ENST00000248054 ZNF70Q9UC06 446 aaPredicted RBP17.15■□□□□ 0.34
SIN3B-201ENST00000248054 AP5Z1O43299 807 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 KRT19P08727 400 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 PLA2G4AP47712 749 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 TBC1D10BQ4KMP7 808 aaPredicted RBP17.14■□□□□ 0.34
SIN3B-201ENST00000248054 DAAM2Q86T65 1068 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 PPM1KQ8N3J5 372 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 RMDN3Q96TC7 470 aa17.14■□□□□ 0.34
SIN3B-201ENST00000248054 PRCPP42785 496 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 CCDC25Q86WR0 208 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 TMEM191BP0C7N4 346 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 KLRK1P26718 216 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 PTK2Q05397 1052 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 C15orf52Q6ZUT6 534 aaKnown RBP17.14■□□□□ 0.33
SIN3B-201ENST00000248054 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 A0A0G2JLW4 131 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 PRR29P0C7W0 189 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 SRGNP10124 158 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 ZDHHC15Q96MV8 337 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 CPSF2Q9P2I0 782 aaKnown RBP17.14■□□□□ 0.33
SIN3B-201ENST00000248054 TXNDC16Q9P2K2 825 aa17.14■□□□□ 0.33
SIN3B-201ENST00000248054 P4HBP07237 508 aaKnown RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 VIMP08670 466 aaKnown RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 COASYQ13057 564 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 STXBP2Q15833 593 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SND1Q7KZF4 910 aaKnown RBP eCLIP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 TUFT1Q9NNX1 390 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 FHOD1Q9Y613 1164 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 NDUFA10O95299 355 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 POLR2BP30876 1174 aaKnown RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SEC23AQ15436 765 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SRGAP1Q7Z6B7 1085 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SENP2Q9HC62 589 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 POLLQ9UGP5 575 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 A0A1W2PQC6 194 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 NDUFB10O96000 172 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 RUNDC3BQ96NL0 473 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 RTFDC1Q9BY42 306 aaPredicted RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 ZHX2Q9Y6X8 837 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SNAP25P60880 206 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 GOLGA8FQ08AF8 430 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 GOLGA8DPQ0D2H9 430 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 SEPT14Q6ZU15 432 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 DPP9Q86TI2 863 aa17.13■□□□□ 0.33
SIN3B-201ENST00000248054 TDP2O95551 362 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 GAS8O95995 478 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
SIN3B-201ENST00000248054 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 CNPY4Q8N129 248 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 TIPINQ9BVW5 301 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
SIN3B-201ENST00000248054 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms