RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GJB7Q6PEY0 223 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 LRRC31Q6UY01 552 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
RAB3IP-201ENST00000247833 TMEM110-MUSTN1A8MSY1 372 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 F5H6K3 240 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 AFPP02771 609 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 SMARCA1P28370 1054 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 CDK17Q00537 523 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 KLRC3Q07444 240 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 PPFIA1Q13136 1202 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 KLHDC7AQ5VTJ3 777 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 KSR1Q8IVT5 923 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 SLFN12Q8IYM2 578 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 CYP2W1Q8TAV3 490 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 GCNT4Q9P109 453 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 CALUO43852 315 aaPredicted RBP13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 DDR1Q08345 913 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 TMEM119Q4V9L6 283 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 MUM1L1Q5H9M0 696 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 ALKBH5Q6P6C2 394 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 SRLQ86TD4 932 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 TSPYL1Q9H0U9 437 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 VIPAS39Q9H9C1 493 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 RABGAP1Q9Y3P9 1069 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 A0A1B0GUL6 1792 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 NDUFAB1O14561 156 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 GH2P01242 217 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 NAP1L4Q99733 375 aaKnown RBP13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 TCEAL9Q9UHQ7 104 aa13.82□□□□□ -0.2
RAB3IP-201ENST00000247833 PTK2Q05397 1052 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 SLC18A3Q16572 532 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 CEP85LQ5SZL2 805 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 UBLCP1Q8WVY7 318 aaPredicted RBP13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 ARL8AQ96BM9 186 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 CCDC17Q96LX7 622 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 CEP63Q96MT8 703 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 TDRD3Q9H7E2 651 aaKnown RBP13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 SSU72P8A0A1W2PR75 194 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 TLR2O60603 784 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 FLOT1O75955 427 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 GLI1P08151 1106 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 CASP4P49662 377 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 MMGT1Q8N4V1 131 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 DPH5Q9H2P9 285 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 IKZF4Q9H2S9 585 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 GAKO14976 1311 aa13.81□□□□□ -0.2
RAB3IP-201ENST00000247833 DDTLA6NHG4 134 aaPredicted RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 GBP6Q6ZN66 633 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 HS2ST1Q7LGA3 356 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 TSEN2Q8NCE0 465 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 LRRN2O75325 713 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 KNOP1Q1ED39 458 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 RBM26Q5T8P6 1007 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 PPP1R18Q6NYC8 613 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 GLT8D2Q9H1C3 349 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 CLRN2A0PK11 232 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 TCP10L2B9ZVM9 353 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 KIAA0754O94854 1291 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 LIG3P49916 1009 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 KCNA1Q09470 495 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 NNTQ13423 1086 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 IFI16Q16666 785 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 RNF187Q5TA31 235 aaPredicted RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 TRIM59Q8IWR1 403 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 DDX47Q9H0S4 455 aaKnown RBP13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 PI4KBQ9UBF8 816 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 STRCQ7RTU9 1775 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 PHLPP1O60346 1717 aa13.8□□□□□ -0.2
RAB3IP-201ENST00000247833 IRS2Q9Y4H2 1338 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 KRIT1O00522 736 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 NR3C1P04150 777 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 UCHL3P15374 230 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 TRADDQ15628 312 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 RNF10Q8N5U6 811 aaKnown RBP13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 VEZTQ9HBM0 779 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 PPFIA4O75335 1185 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 GABPAQ06546 454 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 IFFO1Q0D2I5 559 aa13.79□□□□□ -0.2
RAB3IP-201ENST00000247833 FAM153CQ494X1 144 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms