RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MEIS1O00470 390 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 RAD17O75943 681 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 TAL1P17542 331 aaPredicted RBP17.84■□□□□ 0.45
UBE3D-201ENST00000237186 KCNA3P22001 575 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 CASP5P51878 434 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 RAD51AP2Q09MP3 1159 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 LARGE2Q8N3Y3 721 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 NOA1Q8NC60 698 aaKnown RBP17.84■□□□□ 0.45
UBE3D-201ENST00000237186 WDR18Q9BV38 432 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 OLFML3Q9NRN5 406 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 HDAC6Q9UBN7 1215 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 PGAP2Q9UHJ9 254 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 AKR1B10O60218 316 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 TACC1O75410 805 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 ERLIN1O75477 346 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 SERPING1P05155 500 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 NR2F2P24468 414 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 CKAP4Q07065 602 aaKnown RBP17.83■□□□□ 0.44
UBE3D-201ENST00000237186 SFR1Q86XK3 245 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 AGBL3Q8NEM8 1001 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 ZBED3Q96IU2 234 aaPredicted RBP17.83■□□□□ 0.44
UBE3D-201ENST00000237186 ZMYND15Q9H091 742 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 GBP3Q9H0R5 595 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 DEF6Q9H4E7 631 aa17.83■□□□□ 0.44
UBE3D-201ENST00000237186 CALUO43852 315 aaPredicted RBP17.82■□□□□ 0.44
UBE3D-201ENST00000237186 SLITRK3O94933 977 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 ZBTB7AO95365 584 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 GAP43P17677 238 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 CAP2P40123 477 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 MAGEA1P43355 309 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 SLC9C1Q4G0N8 1177 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 TBC1D5Q92609 795 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 BHMT2Q9H2M3 363 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 ZHX3Q9H4I2 956 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 EHMT1Q9H9B1 1298 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 AIPL1Q9NZN9 384 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 RABGAP1Q9Y3P9 1069 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 MACROD2A1Z1Q3 448 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 TLR2O60603 784 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 CFBP00751 764 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 KCNH2Q12809 1159 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 SFMBT2Q5VUG0 894 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 RINT1Q6NUQ1 792 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 RNF10Q8N5U6 811 aaKnown RBP17.82■□□□□ 0.44
UBE3D-201ENST00000237186 LSM14BQ9BX40 385 aaKnown RBP17.82■□□□□ 0.44
UBE3D-201ENST00000237186 PLCB1Q9NQ66 1216 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 RGL1Q9NZL6 768 aa17.82■□□□□ 0.44
UBE3D-201ENST00000237186 PSME4Q14997 1843 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 ERCC3P19447 782 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 USP14P54578 494 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 NFIL3Q16649 462 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 CEP55Q53EZ4 464 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 DPY19L2P1Q6NXN4 242 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 B3GNT9Q6UX72 402 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 ZNF572Q7Z3I7 529 aaPredicted RBP17.81■□□□□ 0.44
UBE3D-201ENST00000237186 MMS19Q96T76 1030 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 RUSC1Q9BVN2 902 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 GANQ9H2C0 597 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 METTL14Q9HCE5 456 aaKnown RBP17.81■□□□□ 0.44
UBE3D-201ENST00000237186 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
UBE3D-201ENST00000237186 ZNRF3Q9ULT6 936 aa17.81■□□□□ 0.44
UBE3D-201ENST00000237186 TARSL2A2RTX5 802 aaKnown RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 EIF3DO15371 548 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 SLC16A3O15427 465 aaKnown RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 ITIH3Q06033 890 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 LRCH2Q5VUJ6 765 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 C1orf186Q6ZWK4 172 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 ZNF277Q9NRM2 450 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 SNX12Q9UMY4 172 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 ZBTB12Q9Y330 459 aaPredicted RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 SRGAP2O75044 1071 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 TBCAO75347 108 aaKnown RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 RHOXF2BP0C7M4 288 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 MYBP10242 640 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 MCM3P25205 808 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 PTGER2P43116 358 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 PRELPP51888 382 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 POLR2FP61218 127 aaKnown RBP17.8■□□□□ 0.44
UBE3D-201ENST00000237186 VSNL1P62760 191 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 HDXQ7Z353 690 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 RHOXF2Q9BQY4 288 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 WDR11Q9BZH6 1224 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 TMEM39BQ9GZU3 492 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 ABCB6Q9NP58 842 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 NLRC4Q9NPP4 1024 aa17.8■□□□□ 0.44
UBE3D-201ENST00000237186 RSPH10B2B2RC85 870 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 PRPF6O94906 941 aaKnown RBP17.79■□□□□ 0.44
UBE3D-201ENST00000237186 ASNSP08243 561 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 RSPH10BP0C881 870 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 SETQ01105 290 aaPredicted RBP17.79■□□□□ 0.44
UBE3D-201ENST00000237186 SMC1AQ14683 1233 aaKnown RBP17.79■□□□□ 0.44
UBE3D-201ENST00000237186 CCDC174Q6PII3 467 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 LDHDQ86WU2 507 aa17.79■□□□□ 0.44
UBE3D-201ENST00000237186 LUC7LQ9NQ29 371 aaKnown RBP17.79■□□□□ 0.44
UBE3D-201ENST00000237186 ST7Q9NRC1 585 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms