RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TRIM49BA6NDI0 452 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 USP17L10C9JJH3 530 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 EIF3HO15372 352 aaKnown RBP eCLIP22.68■■□□□ 1.22
SNX3-201ENST00000230085 AOC2O75106 756 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 MYBL2P10244 700 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 IDEP14735 1019 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 GUCY2CP25092 1073 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 MTMR2Q13614 643 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 MIIPQ5JXC2 388 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 MS4A4AQ96JQ5 239 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 C7orf25Q9BPX7 421 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 KCNH4Q9UQ05 1017 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 GRIN2DO15399 1336 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 TTLL1O95922 423 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 TRIM21P19474 475 aaKnown RBP22.68■■□□□ 1.22
SNX3-201ENST00000230085 BACE1P56817 501 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 ZYXQ15942 572 aaKnown RBP22.68■■□□□ 1.22
SNX3-201ENST00000230085 AGPAT5Q9NUQ2 364 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 NYAP2Q9P242 653 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 TSKSQ9UJT2 592 aa22.68■■□□□ 1.22
SNX3-201ENST00000230085 CXCL11O14625 94 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 SRGAP2O75044 1071 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 TBC1D8BQ0IIM8 1120 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 SPA17Q15506 151 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 CSGALNACT2Q8N6G5 542 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 CAGE1Q8TC20 777 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 ARHGEF10LQ9HCE6 1279 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 PTPRFP10586 1907 aa22.67■■□□□ 1.22
SNX3-201ENST00000230085 B4DLN1 442 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 EBAG9O00559 213 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 HMGCS2P54868 508 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 NOGQ13253 232 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 SNAPC2Q13487 334 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 RCSD1Q6JBY9 416 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 MMS22LQ6ZRQ5 1243 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 POTEDQ86YR6 584 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 MREGQ8N565 214 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 KAT14Q9H8E8 782 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 HYOU1Q9Y4L1 999 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 MYH4Q9Y623 1939 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 NOVP48745 357 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 GNAQP50148 359 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 GTF2A2P52657 109 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 RNF10Q8N5U6 811 aaKnown RBP22.66■■□□□ 1.22
SNX3-201ENST00000230085 SPATA4Q8NEY3 305 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 CAPS2Q9BXY5 557 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 TMX2Q9Y320 296 aa22.66■■□□□ 1.22
SNX3-201ENST00000230085 A0A0G2JLL6 359 aaPredicted RBP22.65■■□□□ 1.22
SNX3-201ENST00000230085 hCG_1642624A0A1W2PR95 340 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 ZNF263O14978 683 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 COBLO75128 1261 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 CCDC178Q5BJE1 867 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 PRRT2Q7Z6L0 340 aaPredicted RBP22.65■■□□□ 1.22
SNX3-201ENST00000230085 DGKHQ86XP1 1220 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
SNX3-201ENST00000230085 MKL1Q969V6 931 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 CNOT6LQ96LI5 555 aaKnown RBP22.65■■□□□ 1.22
SNX3-201ENST00000230085 CEP89Q96ST8 783 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 KIAA1683Q9H0B3 1180 aa22.65■■□□□ 1.22
SNX3-201ENST00000230085 UBA7P41226 1012 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 FKBP15Q5T1M5 1219 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 CD302Q8IX05 232 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 DNAJC5GQ8N7S2 189 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 EIF1ADQ8N9N8 165 aaKnown RBP22.64■■□□□ 1.22
SNX3-201ENST00000230085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.64■■□□□ 1.22
SNX3-201ENST00000230085 CCDC42Q96M95 316 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 EMILIN3Q9NT22 766 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 STIM2Q9P246 746 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 SIK3Q9Y2K2 1263 aa22.64■■□□□ 1.22
SNX3-201ENST00000230085 CCL15-CCL14A0A0B4J2E2 113 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 C19orf81C9J6K1 198 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 MAPK8IP2Q13387 824 aaPredicted RBP22.63■■□□□ 1.21
SNX3-201ENST00000230085 MOGSQ13724 837 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 CCL15Q16663 113 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 KIAA1755Q5JYT7 1200 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 BRI3BPQ8WY22 251 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 CAPZA3Q96KX2 299 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 ALS2CR12Q96Q35 445 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 TMEM47Q9BQJ4 181 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 TRIM9Q9C026 710 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 GGA2Q9UJY4 613 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 SSU72P8A0A1W2PR75 194 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 MANSC4A6NHS7 340 aaPredicted RBP22.63■■□□□ 1.21
SNX3-201ENST00000230085 RBAK-RBAKDNI3L0D1 243 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 RAD21O60216 631 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 CETPP11597 493 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 SH3D19Q5HYK7 790 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 CENPPQ6IPU0 288 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 CNNM4Q6P4Q7 775 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 SPICE1Q8N0Z3 855 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 OSBPL9Q96SU4 736 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 PTPN18Q99952 460 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 JADE2Q9NQC1 790 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 GEMIN8Q9NWZ8 242 aaKnown RBP22.63■■□□□ 1.21
SNX3-201ENST00000230085 MAPK8IP1Q9UQF2 711 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 PCDHA13Q9Y5I0 950 aa22.63■■□□□ 1.21
SNX3-201ENST00000230085 GADL1Q6ZQY3 521 aa22.62■■□□□ 1.21
SNX3-201ENST00000230085 RIN2Q8WYP3 895 aaPredicted RBP22.62■■□□□ 1.21
SNX3-201ENST00000230085 IFIH1Q9BYX4 1025 aaKnown RBP22.62■■□□□ 1.21
SNX3-201ENST00000230085 ZNF185O15231 689 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms