RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 PCNX4Q63HM2 1172 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 TAF2Q6P1X5 1199 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 EP400NLQ6ZTU2 488 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 ZNF689Q96CS4 500 aaPredicted RBP13.36□□□□□ -0.27
FRG1-201ENST00000226798 FBXL18Q96ME1 805 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 SUPT16HQ9Y5B9 1047 aaKnown RBP13.36□□□□□ -0.27
FRG1-201ENST00000226798 PLXNA4Q9HCM2 1894 aa13.36□□□□□ -0.27
FRG1-201ENST00000226798 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 MBTPS2O43462 519 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 MMP1P03956 469 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 SMAD4Q13485 552 aaKnown RBP13.35□□□□□ -0.27
FRG1-201ENST00000226798 HERC4Q5GLZ8 1057 aaPredicted RBP13.35□□□□□ -0.27
FRG1-201ENST00000226798 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
FRG1-201ENST00000226798 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 HFE2Q6ZVN8 426 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
FRG1-201ENST00000226798 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
FRG1-201ENST00000226798 RTEL1Q9NZ71 1219 aa13.35□□□□□ -0.27
FRG1-201ENST00000226798 KMT2EQ8IZD2 1858 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 MBLAC1A4D2B0 266 aaPredicted RBP13.34□□□□□ -0.27
FRG1-201ENST00000226798 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
FRG1-201ENST00000226798 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
FRG1-201ENST00000226798 SP4Q02446 784 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 TRDNQ13061 729 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 CAMK1Q14012 370 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 CLUL1Q15846 466 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 FBXO47Q5MNV8 452 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 LINC01599Q8WXQ3 324 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 PLVAPQ9BX97 442 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 RWDD1Q9H446 243 aaPredicted RBP13.34□□□□□ -0.27
FRG1-201ENST00000226798 MUTYHQ9UIF7 546 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 TUBE1Q9UJT0 475 aa13.34□□□□□ -0.27
FRG1-201ENST00000226798 ENPP3O14638 875 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 MEIS2O14770 477 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 LINC01565O15544 149 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 DGKIO75912 1065 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 IGHDP01880 384 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 CYP21A2P08686 494 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 KCNA2P16389 499 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 GTF2F1P35269 517 aaKnown RBP eCLIP13.33□□□□□ -0.28
FRG1-201ENST00000226798 PPFIA1Q13136 1202 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 BTG3Q14201 252 aaPredicted RBP13.33□□□□□ -0.28
FRG1-201ENST00000226798 MARCH8Q5T0T0 291 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 USP17L6PQ6QN14 398 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 CRIPAKQ8N1N5 446 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 GIMAP8Q8ND71 665 aaPredicted RBP13.33□□□□□ -0.28
FRG1-201ENST00000226798 P2RX5Q93086 422 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
FRG1-201ENST00000226798 FNDC1Q4ZHG4 1894 aaPredicted RBP13.32□□□□□ -0.28
FRG1-201ENST00000226798 ERICH2A1L162 156 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 ATP9AO75110 1047 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 EYA4O95677 639 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 ADAM15Q13444 863 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 WTAPQ15007 396 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 GRIK4Q16099 956 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 TSHZ1Q6ZSZ6 1077 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 RSPH3Q86UC2 560 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 NLRX1Q86UT6 975 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 RNF135Q8IUD6 432 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 DNAJB3Q8WWF6 145 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 GPRASP2Q96D09 838 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 MSLNLQ96KJ4 702 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 AGO3Q9H9G7 860 aaKnown RBP13.32□□□□□ -0.28
FRG1-201ENST00000226798 ALG13Q9NP73 1137 aaKnown RBP13.32□□□□□ -0.28
FRG1-201ENST00000226798 ERAP1Q9NZ08 941 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 CD207Q9UJ71 328 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
FRG1-201ENST00000226798 MRPL42Q9Y6G3 142 aaKnown RBP13.32□□□□□ -0.28
FRG1-201ENST00000226798 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
FRG1-201ENST00000226798 GSTTP1A0A1W2PQM5 241 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 GSPT1P15170 499 aaKnown RBP13.31□□□□□ -0.28
FRG1-201ENST00000226798 DNAJB1P25685 340 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 MARK3P27448 753 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 ANTXR2P58335 489 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 MRPS6P82932 125 aaKnown RBP13.31□□□□□ -0.28
FRG1-201ENST00000226798 SART3Q15020 963 aaKnown RBP13.31□□□□□ -0.28
FRG1-201ENST00000226798 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
FRG1-201ENST00000226798 SMARCC2Q8TAQ2 1214 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 CUL5Q93034 780 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 CDHR1Q96JP9 859 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 MFSD14AQ96MC6 490 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 CDY2AQ9Y6F7 541 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 SPTBN4Q9H254 2564 aa13.31□□□□□ -0.28
FRG1-201ENST00000226798 FRYLO94915 3013 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 E7EWF7 191 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 STXBP3O00186 592 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 CSPG5O95196 566 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 RPLP2P05387 115 aaKnown RBP13.3□□□□□ -0.28
FRG1-201ENST00000226798 ITGB1P05556 798 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 ITGB5P18084 799 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 SMARCA1P28370 1054 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 CD52P31358 61 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 PTH1RQ03431 593 aa13.3□□□□□ -0.28
FRG1-201ENST00000226798 NAALADL2Q58DX5 795 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms