RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 CFBP00751 764 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 SERPING1P05155 500 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 CHRNA5P30532 468 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 ALDH1B1P30837 517 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-201ENST00000221232 CCDC174Q6PII3 467 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 GOLGA6L1Q8N7Z2 621 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 RPGRIP1Q96KN7 1286 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 A0A1W2PRG0 241 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 ECE1P42892 770 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 NOP2P46087 812 aaKnown RBP16.09■□□□□ 0.17
CNOT3-201ENST00000221232 AOC3Q16853 763 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 SLC27A3Q5K4L6 730 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 IQCEQ6IPM2 695 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 TPH2Q8IWU9 490 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 RUSC1Q9BVN2 902 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 LCMT1Q9UIC8 334 aa16.09■□□□□ 0.17
CNOT3-201ENST00000221232 TAF1LQ8IZX4 1826 aa16.08■□□□□ 0.17
CNOT3-201ENST00000221232 ECE2O60344 883 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 LCA5LO95447 670 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 HOXD13P35453 343 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 ACTN2P35609 894 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 PLS1Q14651 629 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 ASIC2Q16515 512 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 TAF3Q5VWG9 929 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 KRT27Q7Z3Y8 459 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 ETNPPLQ8TBG4 499 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 ZDHHC15Q96MV8 337 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 CLRN2A0PK11 232 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 TARSL2A2RTX5 802 aaKnown RBP16.08■□□□□ 0.16
CNOT3-201ENST00000221232 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 AGPSO00116 658 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 MSH4O15457 936 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.16
CNOT3-201ENST00000221232 MCM3P25205 808 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 TRADDQ15628 312 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 SLFN12Q8IYM2 578 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
CNOT3-201ENST00000221232 SCAF8Q9UPN6 1271 aaKnown RBP16.08■□□□□ 0.16
CNOT3-201ENST00000221232 NHSQ6T4R5 1651 aa16.08■□□□□ 0.16
CNOT3-201ENST00000221232 AKAP3O75969 853 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 PTK2Q05397 1052 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 SPIRE1Q08AE8 756 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 ZC2HC1CQ53FD0 456 aaPredicted RBP16.07■□□□□ 0.16
CNOT3-201ENST00000221232 HYIQ5T013 277 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 SYDE2Q5VT97 1194 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 PRMT6Q96LA8 375 aaPredicted RBP16.07■□□□□ 0.16
CNOT3-201ENST00000221232 CEP63Q96MT8 703 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 ADAMTSL1Q8N6G6 1762 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 GOLGA6BA6NDN3 693 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 HSPA1LP34931 641 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 HAUS3Q68CZ6 603 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 C8orf74Q6P047 294 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 DCAF4Q8WV16 495 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 IQCDQ96DY2 449 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 NYAP2Q9P242 653 aa16.07■□□□□ 0.16
CNOT3-201ENST00000221232 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 SSU72P8A0A1W2PR75 194 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 BMP3P12645 472 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 NMT1P30419 496 aaKnown RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 KNOP1Q1ED39 458 aaKnown RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 KLHL7Q8IXQ5 586 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 AFAP1L1Q8TED9 768 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 LENG9Q96B70 501 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 MASTLQ96GX5 879 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 ABCB11O95342 1321 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 GLI1P08151 1106 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 RBM26Q5T8P6 1007 aaKnown RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 ZNF571Q7Z3V5 609 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 MMGT1Q8N4V1 131 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 RDH13Q8NBN7 331 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 TSEN2Q8NCE0 465 aaKnown RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 ERMNQ8TAM6 284 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 ACER1Q8TDN7 264 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 CSRNP1Q96S65 589 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 KRT12Q99456 494 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 EIF2AK1Q9BQI3 630 aaKnown RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 MED4Q9NPJ6 270 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 RSPH14Q9UHP6 348 aa16.06■□□□□ 0.16
CNOT3-201ENST00000221232 AJAP1Q9UKB5 411 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-201ENST00000221232 ZC3H4Q9UPT8 1303 aaKnown RBP16.05■□□□□ 0.16
CNOT3-201ENST00000221232 TMCO5BA8MYB1 307 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 GUCY2DQ02846 1103 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 SLC18A3Q16572 532 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 KIAA1755Q5JYT7 1200 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 DACT2Q5SW24 774 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 MKL1Q969V6 931 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 EPB41L5Q9HCM4 733 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
CNOT3-201ENST00000221232 OPLAHO14841 1288 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms