RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TTC31Q49AM3 519 aaPredicted RBP18.97■□□□□ 0.63
USB1-201ENST00000219281 CFAP58Q5T655 872 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 GANQ9H2C0 597 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 AIPL1Q9NZN9 384 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 GRID2IPA4D2P6 1211 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 EBAG9O00559 213 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 ZBTB5O15062 677 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 KRT18P05783 430 aaKnown RBP18.97■□□□□ 0.63
USB1-201ENST00000219281 CYP11B2P19099 503 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 KCNH2Q12809 1159 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 EFCAB13Q8IY85 973 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 CASKIN2Q8WXE0 1202 aa18.97■□□□□ 0.63
USB1-201ENST00000219281 ZNF622Q969S3 477 aaKnown RBP eCLIP18.97■□□□□ 0.63
USB1-201ENST00000219281 USP17L15C9J2P7 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L13C9JLJ4 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L11C9JVI0 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L18D6R9N7 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L22D6RA61 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L17D6RBQ6 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L19D6RCP7 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L20D6RJB6 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 ACTN1P12814 892 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 STAT3P40763 770 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 SKOR1P84550 965 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L24Q0WX57 530 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 TRADDQ15628 312 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 USP17L6PQ6QN14 398 aa18.96■□□□□ 0.63
USB1-201ENST00000219281 INPP4AQ96PE3 977 aaPredicted RBP18.96■□□□□ 0.63
USB1-201ENST00000219281 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 APOBEC3HQ6NTF7 200 aaKnown RBP18.95■□□□□ 0.62
USB1-201ENST00000219281 IQCKQ8N0W5 287 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 USP40Q9NVE5 1235 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 ATF5Q9Y2D1 282 aaPredicted RBP18.95■□□□□ 0.62
USB1-201ENST00000219281 ZNF233A6NK53 670 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 MPHOSPH10O00566 681 aaKnown RBP18.95■□□□□ 0.62
USB1-201ENST00000219281 CETN3O15182 167 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 MED24O75448 989 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 NOP2P46087 812 aaKnown RBP18.95■□□□□ 0.62
USB1-201ENST00000219281 ATP1A2P50993 1020 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 PDCLQ13371 301 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
USB1-201ENST00000219281 ARSHQ5FYA8 562 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 KLHL7Q8IXQ5 586 aa18.95■□□□□ 0.62
USB1-201ENST00000219281 COL11A2P13942 1736 aaPredicted RBP18.94■□□□□ 0.62
USB1-201ENST00000219281 A0A087WUV0 522 aaPredicted RBP18.94■□□□□ 0.62
USB1-201ENST00000219281 CDC42EP5Q6NZY7 148 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 PIK3R5Q8WYR1 880 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 DBNDD1Q9H9R9 158 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 HDAC9Q9UKV0 1011 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 FAM169AQ9Y6X4 670 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 RAD51CO43502 376 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 SLC9A1P19634 815 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 NR2F2P24468 414 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 CASP5P51878 434 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 PTK2Q05397 1052 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 GPATCH4Q5T3I0 446 aaKnown RBP18.94■□□□□ 0.62
USB1-201ENST00000219281 ZC3H3Q8IXZ2 948 aaKnown RBP18.94■□□□□ 0.62
USB1-201ENST00000219281 USP38Q8NB14 1042 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 TAF4BQ92750 862 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 FAM107BQ9H098 131 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 SAMM50Q9Y512 469 aa18.94■□□□□ 0.62
USB1-201ENST00000219281 POTEFA5A3E0 1075 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 KCNK3O14649 394 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 POTEIP0CG38 1075 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 SLURP2P0DP57 97 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 SLC12A3P55017 1021 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 EDRF1Q3B7T1 1238 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 POTEGQ6S5H5 508 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 POTEEQ6S8J3 1075 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 ZNF571Q7Z3V5 609 aaPredicted RBP18.93■□□□□ 0.62
USB1-201ENST00000219281 TADA2BQ86TJ2 420 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 DNAAF5Q86Y56 855 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 KCNMB3Q9NPA1 279 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 RAD21O60216 631 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 SHMT1P34896 483 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 RPS6KA1Q15418 735 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 HHIPL2Q6UWX4 724 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 IRF2BP2Q7Z5L9 587 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 MICALL1Q8N3F8 863 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 MREGQ8N565 214 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 NAP1L4Q99733 375 aaKnown RBP18.93■□□□□ 0.62
USB1-201ENST00000219281 DHX36Q9H2U1 1008 aaKnown RBP18.93■□□□□ 0.62
USB1-201ENST00000219281 GOLPH3Q9H4A6 298 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 PCDHAC2Q9Y5I4 1007 aa18.93■□□□□ 0.62
USB1-201ENST00000219281 FRMD3A2A2Y4 597 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 RXRBP28702 533 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 TNNC1P63316 161 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 NFIAQ12857 509 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 PTPROQ16827 1216 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 PPP4R3CPQ6ZMV5 832 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 PODNQ7Z5L7 613 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 SPAG5Q96R06 1193 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 SWAP70Q9UH65 585 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 FOCADQ5VW36 1801 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 MYH7BA7E2Y1 1941 aa18.92■□□□□ 0.62
USB1-201ENST00000219281 DPY19L2P1Q6NXN4 242 aa18.91■□□□□ 0.62
USB1-201ENST00000219281 ZFPM1Q8IX07 1006 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms