RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 POTEGQ6S5H5 508 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 POTEEQ6S8J3 1075 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 MTMR4Q9NYA4 1195 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 FAM169AQ9Y6X4 670 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 FXR2P51116 673 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 EPHB4P54760 987 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 PIK3R5Q8WYR1 880 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 RNPC3Q96LT9 517 aaKnown RBP17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 LZTS2Q9BRK4 669 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 LRRC4CQ9HCJ2 640 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 AJAP1Q9UKB5 411 aaPredicted RBP17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 PVALEFA0A1B0GWK0 134 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 RAD51CO43502 376 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 HSF2BPO75031 334 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SHMT1P34896 483 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SLC9C1Q4G0N8 1177 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 ZCWPW2Q504Y3 356 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 STRIP1Q5VSL9 837 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SCFD1Q8WVM8 642 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 C7orf43Q8WVR3 580 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 CNKSR1Q969H4 720 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 TSG101Q99816 390 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 BCS1LQ9Y276 419 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 RGPD3A6NKT7 1758 aaPredicted RBP17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 RGPD4Q7Z3J3 1758 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SCN9AQ15858 1988 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 KCNK3O14649 394 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 HPDP32754 393 aaPredicted RBP17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 NOVP48745 357 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 PPFIA1Q13136 1202 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 CFAP221Q4G0U5 840 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 GPBP1Q86WP2 473 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 SH3GL2Q99962 352 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
SNAPC1-201ENST00000216294 GRID2IPA4D2P6 1211 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 EIF3HO15372 352 aaKnown RBP eCLIP17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 PJA2O43164 708 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 C21orf2O43822 256 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 FKBP3Q00688 224 aaKnown RBP17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 LRRC63Q05C16 580 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 KCNA1Q09470 495 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 KLHL30Q0D2K2 578 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 ADAM9Q13443 819 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 TMEM119Q4V9L6 283 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 CHADLQ6NUI6 762 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 ZDHHC15Q96MV8 337 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 SFI1A8K8P3 1242 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 TULP1O00294 542 aaPredicted RBP17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 MED24O75448 989 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 PTK2Q05397 1052 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 P2RX7Q99572 595 aaKnown RBP17.39■□□□□ 0.37
SNAPC1-201ENST00000216294 IGKV6D-41A0A0C4DH26 115 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 POLD1P28340 1107 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 ARFGEF1Q9Y6D6 1849 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 RSPH10B2B2RC85 870 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 PLA2G4BP0C869 781 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 RSPH10BP0C881 870 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 FLT3P36888 993 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 KCNH2Q12809 1159 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 ARSHQ5FYA8 562 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 DCAF17Q5H9S7 520 aaPredicted RBP17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 CFAP58Q5T655 872 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 ZNF571Q7Z3V5 609 aaPredicted RBP17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 NEUROG2Q9H2A3 272 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 DNAJC18Q9H819 358 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 CEP72Q9P209 647 aa17.38■□□□□ 0.37
SNAPC1-201ENST00000216294 CLIC2O15247 247 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 SERPING1P05155 500 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 HLA-DOAP06340 250 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 PRLRP16471 622 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 PABPC4Q13310 644 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 HLTFQ14527 1009 aaKnown RBP eCLIP17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 ZNF572Q7Z3I7 529 aaPredicted RBP17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 ADAT2Q7Z6V5 191 aaKnown RBP17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 DDTLA6NHG4 134 aaPredicted RBP17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 TMCO5BA8MYB1 307 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 EBAG9O00559 213 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 COPB2P35606 906 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 EPS15P42566 896 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 CASP4P49662 377 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 NAB2Q15742 525 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 TCERG1LQ5VWI1 586 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 MAATS1Q7Z4T9 603 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 TADA2BQ86TJ2 420 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 KSR1Q8IVT5 923 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 FAM198AQ9UFP1 575 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 SWAP70Q9UH65 585 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
SNAPC1-201ENST00000216294 NDUFAB1O14561 156 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 ITGA4P13612 1032 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 NAA35Q5VZE5 725 aa17.36■□□□□ 0.37
SNAPC1-201ENST00000216294 DDX47Q9H0S4 455 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms