RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 H0Y3Z8 333 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 PRCPP42785 496 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 ARHGAP44Q17R89 818 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 COA7Q96BR5 231 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 BATF3Q9NR55 127 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 SKIP12755 728 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 ABCB4P21439 1286 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 SCNN1DP51172 638 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 APBA1Q02410 837 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 SP4Q02446 784 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 CRYMQ14894 314 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 MAN2A1Q16706 1144 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 SEL1L2Q5TEA6 688 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 GSTA5Q7RTV2 222 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 MINPP1Q9UNW1 487 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 LEMD3Q9Y2U8 911 aa13.2□□□□□ -0.3
TSPAN9-201ENST00000011898 KCNJ6P48051 423 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 PFKFB3Q16875 520 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 CCDC92Q53HC0 331 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 GSPT2Q8IYD1 628 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 SMCR8Q8TEV9 937 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 CPVLQ9H3G5 476 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 DCP1AQ9NPI6 582 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 FAM205CA6NFA0 338 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 SUN1O94901 812 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 EPHB4P54760 987 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 CYP4A11Q02928 519 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 ARHGAP24Q8N264 748 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 CCHCR1Q8TD31 782 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 RIN2Q8WYP3 895 aaPredicted RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 OSBPL1AQ9BXW6 950 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 TEKT1Q969V4 418 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 HOMER3Q9NSC5 361 aa13.19□□□□□ -0.3
TSPAN9-201ENST00000011898 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 ANKRD20A3Q5VUR7 823 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 SYCE1Q8N0S2 351 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 CEP70Q8NHQ1 597 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 RIC1Q4ADV7 1423 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 DDX39AO00148 427 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 FYB2Q5VWT5 728 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 NYAP1Q6ZVC0 841 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 EVI5O60447 810 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 N4BP1O75113 896 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 VSNL1P62760 191 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 DENND2CQ68D51 928 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 CFAP61Q8NHU2 1237 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 CHCHD3Q9NX63 227 aaKnown RBP13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 MROH7-TTC4A0A0A0MT08 1334 aa13.18□□□□□ -0.3
TSPAN9-201ENST00000011898 KRIT1O00522 736 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 DIAPH2O60879 1101 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 ATP5DP30049 168 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 SLC7A5Q01650 507 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 STYK1Q6J9G0 422 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 ARMCX6Q7L4S7 300 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 GJA10Q969M2 543 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 EPB41L5Q9HCM4 733 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 C4AP0C0L4 1744 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 TTC26A0AVF1 554 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 PSMD6Q15008 389 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 RIC8AQ9NPQ8 531 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 STK17AQ9UEE5 414 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 LGALS16A8MUM7 142 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 NR2F2P24468 414 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 SLC16A2P36021 539 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 C2orf54Q08AI8 447 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 PABPC4Q13310 644 aaKnown RBP eCLIP13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 EXOC3L4Q17RC7 722 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 KIAA0825Q8IV33 1275 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 PP2D1A8MPX8 630 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 SRGAP2O75044 1071 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 CYP2J2P51589 502 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 HVCN1Q96D96 273 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
TSPAN9-201ENST00000011898 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms