RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 PpihQ9D868 188 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Ggps1Q9WTN0 300 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 PhipQ8VDD9 1821 aaKnown RBP8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Dhtkd1A2ATU0 921 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Mcm5P49718 733 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 StamP70297 548 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Pstpip1P97814 415 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Spdye4aQ5IBH6 268 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Igbp1Q61249 340 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Adam6bQ6IMH7 756 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Abcf1Q6P542 837 aaKnown RBP8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Nsun6Q7TS68 476 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Mrgprx1Q8CIP3 322 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Rab3il1Q8VDV3 383 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Txndc5Q91W90 417 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Tmem192Q9CXT7 266 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Rnf181Q9CY62 165 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Itga2bQ9QUM0 1033 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Sucla2Q9Z2I9 463 aa8.29□□□□□ -1.08
Usp40-204ENSMUST00000187758 Zfp984A2A7A2 547 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 1700018F24RikB2RW27 314 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Zfp213E9QAW0 468 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 UgcgO88693 394 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Got1P05201 413 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Tpm1P58771 284 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Ly9Q01965 654 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Nlrp4cQ3TKR3 982 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Tmem63bQ3TWI9 832 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Ece1Q4PZA2 769 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Scarf1Q5ND28 820 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Tgoln2Q62314 363 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Cyp4f39Q8BGU0 532 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Iws1Q8C1D8 766 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Spata32Q8C5V0 334 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Gys2Q8VCB3 704 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Olr1Q9EQ09 363 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Arhgef7Q9ES28 862 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Sorbs3Q9R1Z8 733 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Vmn2r78K7N6U5 853 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Slc16a2O70324 545 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Axin2O88566 840 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 TxnP10639 105 aaKnown RBP8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Cyp2b10P12791 500 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Cyp11b2P15539 500 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Pou2f2Q00196 463 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Osbpl2Q8BX94 484 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Bcas3Q8CCN5 928 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Pcdha7Q91Y13 937 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Ctu1Q99J10 420 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Ranbp17Q99NF8 1088 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Znf687Q9D2D7 1237 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Copb1Q9JIF7 953 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Abhd2Q9QXM0 425 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Zbtb12Q9Z150 459 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Lrrc38A2VDH3 298 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Stra6O70491 670 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Akr1b1P45376 316 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Morf4l1P60762 362 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Cbx1P83917 185 aaKnown RBP8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Miga1Q4QQM5 600 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 E2f8Q58FA4 860 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Serpinb3dQ6UKZ0 387 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Btnl9Q8BJE2 536 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Sun2Q8BJS4 731 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Tm4sf4Q91XD3 202 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Klhl10Q9D5V2 608 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 CoasyQ9DBL7 563 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Mxra8Q9DBV4 442 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Pex11aQ9Z211 246 aa8.28□□□□□ -1.08
Usp40-204ENSMUST00000187758 Fam205aA2APU8 1308 aa8.27□□□□□ -1.08
Usp40-204ENSMUST00000187758 Sbno2Q7TNB8 1349 aa8.27□□□□□ -1.08
Usp40-204ENSMUST00000187758 Smchd1Q6P5D8 2007 aaKnown RBP8.27□□□□□ -1.08
Usp40-204ENSMUST00000187758 CebpzP53569 1052 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 PklrP53657 574 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 PtgdrP70263 357 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Fgfr4Q03142 799 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Gm3414Q3TNU4 584 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Slc9a2Q3ZAS0 814 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 A1cfQ5YD48 595 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Smarca1Q6PGB8 1046 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Armcx3Q8BHS6 379 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ipo5Q8BKC5 1097 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Kiaa0391Q8JZY4 584 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Prpf6Q91YR7 941 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Dnajc18Q9CZJ9 357 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Nudt12Q9DCN1 462 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Cntn6Q9JMB8 1028 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Phtf1Q9QZ09 761 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 MafgO54790 162 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 PrkceP16054 737 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Etv6P97360 485 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Specc1lQ2KN98 1118 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Trmt1Q3TX08 663 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Pank2Q3U4S0 443 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Mcph1Q7TT79 822 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Ddx10Q80Y44 875 aaKnown RBP8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 EtnpplQ8BWU8 499 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 OtoaQ8K561 1137 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Smtnl1Q99LM3 459 aa8.27□□□□□ -1.09
Usp40-204ENSMUST00000187758 Katnbl1Q9CWJ3 299 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms