RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Q9D5Q8 446 aa11.85□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Ccdc89Q9DA73 370 aa11.85□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Pcdh15Q99PJ1 1943 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Cetn3O35648 167 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Nmt1O70310 496 aaKnown RBP11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Cd68P31996 326 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Cst8P32766 142 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Nr2f2P43135 414 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Ano9P86044 747 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Fgfr4Q03142 799 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Znf354cQ571J5 560 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Shc3Q61120 474 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Rgl2Q61193 778 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Kiaa0754Q69ZZ9 979 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Ddx55Q6ZPL9 600 aaKnown RBP11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Usp17leQ7M764 540 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Raver2Q7TPD6 673 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Cog5Q8C0L8 829 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Cdk17Q8K0D0 523 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Enox2Q8R0Z2 598 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Vps18Q8R307 973 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Rassf3Q99P51 232 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Vta1Q9CR26 309 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Rnaseh2aQ9CWY8 301 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Tmx2Q9D710 295 aaKnown RBP11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Rwdd2aQ9D9S3 292 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 Slc12a7Q9WVL3 1083 aa11.84□□□□□ -0.51
Ttc39a-202ENSMUST00000106618 JcadQ5DTX6 1320 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pgap3A2A559 320 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cpb1B2RS76 415 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Rexo5D3YW29 759 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 TazI7HJS2 263 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Gm10436L7N1Y3 520 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Gm4758L7N258 96 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Atp9aO70228 1047 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Idh1O88844 414 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Prkg1P0C605 671 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 SlmapQ3URD3 845 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Carmil2Q3V3V9 1296 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Mettl25Q6NXH8 597 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Dync1li2Q6PDL0 492 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pabpc4Q6PHQ9 660 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Recql4Q75NR7 1216 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pank4Q80YV4 820 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Btnl9Q8BJE2 536 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Plagl2Q925T4 496 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Ppp1r3aQ99MR9 1089 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cntn6Q9JMB8 1028 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Extl3Q9WVL6 918 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Dicer1Q8R418 1916 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Otud7bB2RUR8 840 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Got1P05201 413 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 P4hbP09103 509 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Ifnar1P33896 590 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Etv6P97360 485 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Pla2g6P97819 807 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Zc3h18Q0P678 948 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Eepd1Q3TGW2 569 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Ogfod1Q3U0K8 545 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Gm5169Q5M8P2 212 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Trim25Q61510 634 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Sema4bQ62179 823 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Msantd2Q6NZR2 559 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Iqcb1Q8BP00 598 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Epc2Q8C0I4 808 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Ccdc12Q8R344 166 aaKnown RBP11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Slc14a1Q8VHL0 384 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Fam76aQ922G2 307 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Vps33aQ9D2N9 598 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 ChmQ9QXG2 665 aa11.83□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 PhipQ8VDD9 1821 aaKnown RBP11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Klhdc7aA2APT9 773 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Eif3dO70194 548 aaKnown RBP11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Slc16a2O70324 545 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Nkx2-5P42582 318 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Hps5P59438 1126 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Agxt2Q3UEG6 513 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Mier3Q3UHF3 551 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cacna2d4Q5RJF7 1116 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 P4ha1Q60715 534 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Krt9Q6RHW0 743 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Maip1Q8BHE8 291 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Eif3cQ8R1B4 911 aaKnown RBP11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 AagabQ8R2R3 316 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Slc12a8Q8VI23 705 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Aldh1b1Q9CZS1 519 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Tpcn1Q9EQJ0 817 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Klra10Q9R1G6 266 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cntnap2Q9CPW0 1332 aa11.82□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Gm44503E9PYU5 387 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Oog1E9Q5G7 496 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Kcnh2O35219 1162 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Nr1i3O35627 358 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 UgcgO88693 394 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Meis3P97368 378 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Sox10Q04888 466 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Neurl1bQ0MW30 546 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Cep126Q0VBV7 1103 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 Ccdc102aQ3TMW1 549 aa11.81□□□□□ -0.52
Ttc39a-202ENSMUST00000106618 E2f7Q6S7F2 904 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms