RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Tgif2lx2Q8K5B9 231 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Eef1gQ9D8N0 437 aaKnown RBP11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Zfyve9A2A8R0 1397 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pnma5Q5DTT8 618 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 4932411N23RikQ8C0S0 470 aa11.32□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rfx8D3YU81 596 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Sept2P42208 361 aaKnown RBP11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Tp53i13Q5F267 385 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Szrd1Q6NXN1 152 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gprasp2Q8BUY8 826 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Olfr397Q8VEZ6 315 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 DonsonQ9QXP4 560 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Sgk1Q9WVC6 431 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Knl1Q66JQ7 1612 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cacnb3P54285 484 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm10488Q4KL05 212 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Nuak1Q641K5 658 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Nek9Q8K1R7 984 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Dppa3Q8QZY3 150 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 MgarpQ8VI64 283 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 1700020D05RikQ99PB1 294 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 RabggtaQ9JHK4 567 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 HnrnpcQ9Z204 313 aaKnown RBP11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 C87977A2A958 498 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 2610008E11RikG3X964 669 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cd86P42082 309 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cyp2e1Q05421 493 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cep126Q0VBV7 1103 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Phka2Q8BWJ3 1235 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pde10aQ8CA95 790 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Trappc12Q8K2L8 797 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Med15Q924H2 789 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 GhdcQ99J23 532 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ndc80Q9D0F1 642 aaKnown RBP11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Fam111aQ9D2L9 613 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 4931423N10RikQ9D4J9 382 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ccdc103Q9D9P2 237 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rpn2Q9DBG6 631 aaKnown RBP11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Tmed2Q9R0Q3 201 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 B3galt4Q9Z0F0 371 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ism1A2ATD1 454 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Olfr67F8VPJ8 320 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rab23P35288 237 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Guca1aP43081 202 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 CoilQ5SU73 570 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pdcl2Q78Y63 240 aa11.31□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Trim5E9PV98 497 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Serpind1P49182 478 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm136Q3V037 328 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Madcam1Q61826 405 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Snx17Q8BVL3 470 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Atad2Q8CDM1 1040 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Stard7Q8R1R3 373 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ushbp1Q8R370 680 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 DtnaQ9D2N4 746 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Slc25a13Q9QXX4 676 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Zbtb18Q9WUK6 522 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Mtmr1Q9Z2C4 669 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ubn2Q80WC1 1314 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ccdc152E9PX14 254 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Dcpp3L7N259 170 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Zbtb7aO88939 569 aaKnown RBP11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Polr2fP61219 127 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ano9P86044 747 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ccdc138Q0VF22 680 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gpc3Q8CFZ4 579 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 SyncQ9EPM5 470 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Gm28042B7ZCM9 1014 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rfpl4bJ3QPR6 266 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pla2g4bP0C871 782 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 GssP51855 474 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ifit1Q64282 463 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Paxip1Q6NZQ4 1056 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Jade1Q6ZPI0 834 aaKnown RBP11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 SrlQ7TQ48 910 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Susd4Q8BH32 490 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pum3Q8BKS9 647 aaKnown RBP11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ddx19bQ8BZY3 494 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rpap2Q8VC34 614 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Chd1lQ9CXF7 900 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Mtif3Q9CZD5 276 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Rnf6Q9DBU5 667 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ppp1r2Q9DCL8 206 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ehd4Q9EQP2 541 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Aldh1a3Q9JHW9 512 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Serpinb6bO08804 377 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Dynlt1P51807 113 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Pcsk1P63239 753 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 DSCC1Q14AI0 399 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Trim72Q1XH17 477 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Trip13Q3UA06 432 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Cog7Q3UM29 770 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Hoxa13Q62424 386 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Ttc7aQ8BGB2 858 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Bola2Q8BGS2 86 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Suds3Q8BR65 328 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Slc35g1Q8BY79 368 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 P3h2Q8CG71 703 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 ScgnQ91WD9 276 aa11.3□□□□□ -0.6
Rtn3-204ENSMUST00000088171 Casp14O89094 257 aa11.29□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms