RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 STK24Q9Y6E0 443 aa19.65■□□□□ 0.74
PHGDH-232ENST00000641947 PASKQ96RG2 1323 aa19.64■□□□□ 0.74
PHGDH-232ENST00000641947 SYNRGQ9UMZ2 1314 aa19.64■□□□□ 0.74
PHGDH-232ENST00000641947 ARID2Q68CP9 1835 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 CCNE2O96020 404 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 PGK2P07205 417 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 EHHADHQ08426 723 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 PDE4DQ08499 809 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 UNC13DQ70J99 1090 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 GPBP1Q86WP2 473 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 RASAL3Q86YV0 1011 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 KIAA0895Q8NCT3 520 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 NFE2L3Q9Y4A8 694 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 TELO2Q9Y4R8 837 aa19.64■□□□□ 0.73
PHGDH-232ENST00000641947 POTEB2H3BUK9 544 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 KCNA2P16389 499 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 CACNB1Q02641 598 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-232ENST00000641947 HSP90AA4PQ58FG1 418 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 TPH2Q8IWU9 490 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 ADSSL1Q8N142 457 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 BANK1Q8NDB2 785 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 PIGOQ8TEQ8 1089 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 IWS1Q96ST2 819 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 TRIM5Q9C035 493 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 EFCC1Q9HA90 598 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 EXOC1Q9NV70 894 aa19.63■□□□□ 0.73
PHGDH-232ENST00000641947 MYH9P35579 1960 aaKnown RBP19.63■□□□□ 0.73
PHGDH-232ENST00000641947 ZNF18P17022 549 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 EDNRBP24530 442 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-232ENST00000641947 MIER3Q7Z3K6 550 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 ANKRD13CQ8N6S4 541 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 SYT2Q8N9I0 419 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-232ENST00000641947 SMCR8Q8TEV9 937 aaPredicted RBP19.62■□□□□ 0.73
PHGDH-232ENST00000641947 LXNQ9BS40 222 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 SAMSN1Q9NSI8 373 aaKnown RBP19.62■□□□□ 0.73
PHGDH-232ENST00000641947 TBC1D22BQ9NU19 505 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 DNM3Q9UQ16 869 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 DNAJC25-GNG10A0A024R161 153 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 PVALEFA0A1B0GWK0 134 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 EYA4O95677 639 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 RAD51AP2Q09MP3 1159 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 NLRX1Q86UT6 975 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 GLIS3Q8NEA6 775 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 RUSC1Q9BVN2 902 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 BHMT2Q9H2M3 363 aa19.62■□□□□ 0.73
PHGDH-232ENST00000641947 DOCK3Q8IZD9 2030 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 IDEP14735 1019 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 COPB2P35606 906 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 PMS1P54277 932 aaKnown RBP19.61■□□□□ 0.73
PHGDH-232ENST00000641947 SP2Q02086 613 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 COASYQ13057 564 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 UGCGQ16739 394 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 SAPCD2Q86UD0 394 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 SHCBP1Q8NEM2 672 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 NELFBQ8WX92 580 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 MMP19Q99542 508 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 FGFBP2Q9BYJ0 223 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 SLC39A2Q9NP94 309 aa19.61■□□□□ 0.73
PHGDH-232ENST00000641947 TRIM49BA6NDI0 452 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 SPATA31C2B4DYI2 1134 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 STAM2O75886 525 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 PAK1Q13153 545 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 STXBP2Q15833 593 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 GPRC5AQ8NFJ5 357 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 GTF3C2Q8WUA4 911 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-232ENST00000641947 LRRC27Q9C0I9 530 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 MROH8Q9H579 483 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 RWDD2AQ9UIY3 292 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 FRMD3A2A2Y4 597 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 EIF3JO75822 258 aaKnown RBP19.6■□□□□ 0.73
PHGDH-232ENST00000641947 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
PHGDH-232ENST00000641947 FANCCQ00597 558 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 WDR78Q5VTH9 848 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 SPATA1Q5VX52 437 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 MORF4L1Q9UBU8 362 aa19.6■□□□□ 0.73
PHGDH-232ENST00000641947 IGF2BP3O00425 579 aaKnown RBP eCLIP19.59■□□□□ 0.73
PHGDH-232ENST00000641947 MAFGO15525 162 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 SORBS3O60504 671 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 MUTP22033 750 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 GIT2Q14161 759 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 SPC24Q8NBT2 197 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 NEK9Q8TD19 979 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 MRFAP1L1Q96HT8 127 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 REEP2Q9BRK0 252 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 XPO4Q9C0E2 1151 aaKnown RBP19.59■□□□□ 0.73
PHGDH-232ENST00000641947 PANK4Q9NVE7 773 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 IFNKQ9P0W0 207 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 ADD3Q9UEY8 706 aaKnown RBP19.59■□□□□ 0.73
PHGDH-232ENST00000641947 PCDHA2Q9Y5H9 948 aa19.59■□□□□ 0.73
PHGDH-232ENST00000641947 KIF3CO14782 793 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 ICAM3P32942 547 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 TPM4P67936 248 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 KRT76Q01546 638 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 KCTD2Q14681 263 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 COBLL1Q53SF7 1204 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 CDKAL1Q5VV42 579 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 RINT1Q6NUQ1 792 aa19.58■□□□□ 0.73
PHGDH-232ENST00000641947 CCDC47Q96A33 483 aaKnown RBP19.58■□□□□ 0.73
PHGDH-232ENST00000641947 POLD4Q9HCU8 107 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms