RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 BAP1Q92560 729 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 REEP2Q9BRK0 252 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 VCPKMTQ9H867 229 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 PRDM10Q9NQV6 1147 aa18.88■□□□□ 0.61
PHGDH-211ENST00000641213 LRRC53A6NM62 1247 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 EML1O00423 815 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 CASP5P51878 434 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 CYP4A11Q02928 519 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 RRAGAQ7L523 313 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 MTMR14Q8NCE2 650 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 NEK11Q8NG66 645 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 SMCR8Q8TEV9 937 aaPredicted RBP18.87■□□□□ 0.61
PHGDH-211ENST00000641213 EIF2AK1Q9BQI3 630 aaKnown RBP18.87■□□□□ 0.61
PHGDH-211ENST00000641213 WDR18Q9BV38 432 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 EDEM3Q9BZQ6 932 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 MYH11P35749 1972 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 FER1L6Q2WGJ9 1857 aa18.87■□□□□ 0.61
PHGDH-211ENST00000641213 GCOM1H8Y6P7 765 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 POLR2MP0CAP2 368 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 PNMA6AP0CW24 399 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 CAP2P40123 477 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 VAV2P52735 878 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 PPP4R3CPQ6ZMV5 832 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 EHBP1Q8NDI1 1231 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 AGBL3Q8NEM8 1001 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 RGS17Q9UGC6 210 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 LOXHD1Q8IVV2 1947 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 PLA2G6O60733 806 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 SEC31AO94979 1220 aaKnown RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 ADAM9Q13443 819 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 SPA17Q15506 151 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 EDRF1Q3B7T1 1238 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 CC2D1AQ6P1N0 951 aaPredicted RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 TRAPPC11Q7Z392 1133 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 KRT26Q7Z3Y9 468 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 FAM83AQ86UY5 434 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 SFR1Q86XK3 245 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 PURBQ96QR8 312 aaKnown RBP18.86■□□□□ 0.61
PHGDH-211ENST00000641213 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 PGAP2Q9UHJ9 254 aa18.86■□□□□ 0.61
PHGDH-211ENST00000641213 ENC1O14682 589 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 LCA5LO95447 670 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 EIF4A3P38919 411 aaKnown RBP18.85■□□□□ 0.61
PHGDH-211ENST00000641213 TUBB4BP68371 445 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 PDXDC1Q6P996 788 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 POTEAQ6S8J7 498 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 EPM2AIP1Q7L775 607 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-211ENST00000641213 BHMT2Q9H2M3 363 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 ANKZF1Q9H8Y5 726 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 RGL1Q9NZL6 768 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 DUSP10Q9Y6W6 482 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 NOL4O94818 638 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 EYA4O95677 639 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 KIF11P52732 1056 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 CACNA2D4Q7Z3S7 1137 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 RUSC1Q9BVN2 902 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 GLIS2Q9BZE0 524 aaPredicted RBP18.85■□□□□ 0.61
PHGDH-211ENST00000641213 SH2D4AQ9H788 454 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 HDAC6Q9UBN7 1215 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 MRPL11Q9Y3B7 192 aaKnown RBP18.85■□□□□ 0.61
PHGDH-211ENST00000641213 RABGAP1Q9Y3P9 1069 aa18.85■□□□□ 0.61
PHGDH-211ENST00000641213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.85■□□□□ 0.61
PHGDH-211ENST00000641213 CTAGE15A4D2H0 777 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 PSMD10O75832 226 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 ATP1A1P05023 1023 aaKnown RBP18.84■□□□□ 0.61
PHGDH-211ENST00000641213 CTAGE8P0CG41 777 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 HOXD13P35453 343 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 KIF5AQ12840 1032 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 PAPD7Q5XG87 772 aaKnown RBP18.84■□□□□ 0.61
PHGDH-211ENST00000641213 SLC30A10Q6XR72 485 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 CTAGE6Q86UF2 777 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 CTAGE4Q8IX94 777 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 KCTD17Q8N5Z5 321 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 SLC5A5Q92911 643 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 ZBED3Q96IU2 234 aaPredicted RBP18.84■□□□□ 0.61
PHGDH-211ENST00000641213 HSD17B14Q9BPX1 270 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 TSGA10Q9BZW7 698 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 CEP72Q9P209 647 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 TRAF3IP3Q9Y228 551 aa18.84■□□□□ 0.61
PHGDH-211ENST00000641213 RSPH10B2B2RC85 870 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 CETN3O15182 167 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 RSPH10BP0C881 870 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 UBXN2AP68543 259 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 KNOP1Q1ED39 458 aaKnown RBP18.83■□□□□ 0.61
PHGDH-211ENST00000641213 LRCH2Q5VUJ6 765 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 MSANTD4Q8NCY6 345 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 IFIH1Q9BYX4 1025 aaKnown RBP18.83■□□□□ 0.61
PHGDH-211ENST00000641213 FBXO28Q9NVF7 368 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 FEM1BQ9UK73 627 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 FAM184BQ9ULE4 1060 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 PCDHA13Q9Y5I0 950 aa18.83■□□□□ 0.61
PHGDH-211ENST00000641213 ATP8B1O43520 1251 aa18.83■□□□□ 0.6
PHGDH-211ENST00000641213 NR2F2P24468 414 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms