RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MAF1Q9H063 256 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 UNC45AQ9H3U1 944 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 PXMP2Q9NR77 195 aa19.21■□□□□ 0.67
PHGDH-208ENST00000641023 SPDYE16A6NNV3 312 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-208ENST00000641023 KCNJ6P48051 423 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 RAD51AP2Q09MP3 1159 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 XRRA1Q6P2D8 792 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 ANKRD13AQ8IZ07 590 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 TSG101Q99816 390 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 TMX1Q9H3N1 280 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.2■□□□□ 0.661e-6■□□□□ 10.9
PHGDH-208ENST00000641023 ZC3H4Q9UPT8 1303 aaKnown RBP19.2■□□□□ 0.66
PHGDH-208ENST00000641023 NPHP3-ACAD11A0A0J9YXS1 232 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 PPATQ06203 517 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 GIT2Q14161 759 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 GPR162Q16538 588 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 NEK9Q8TD19 979 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 NACC1Q96RE7 527 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 ACAD9Q9H845 621 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 TBC1D22BQ9NU19 505 aa19.2■□□□□ 0.66
PHGDH-208ENST00000641023 TPM1P09493 284 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-208ENST00000641023 CACNB1Q02641 598 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-208ENST00000641023 UBXN1Q04323 297 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 PLS1Q14651 629 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 LRRC41Q15345 812 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 CDCA5Q96FF9 252 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 AGO4Q9HCK5 861 aaKnown RBP19.19■□□□□ 0.66
PHGDH-208ENST00000641023 KCND1Q9NSA2 647 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 PCDHA2Q9Y5H9 948 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 RLFQ13129 1914 aa19.19■□□□□ 0.66
PHGDH-208ENST00000641023 GLTPD2A6NH11 291 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 AKR1B15C9JRZ8 316 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 ERO1BQ86YB8 467 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 TC2NQ8N9U0 490 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 CNOT6LQ96LI5 555 aaKnown RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 REEP2Q9BRK0 252 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 TUBGCP2Q9BSJ2 902 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 RBBP6Q7Z6E9 1792 aaKnown RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 DDX39AO00148 427 aaKnown RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 ADKP55263 362 aaKnown RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 TTLL12Q14166 644 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 MIER3Q7Z3K6 550 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 NSUN6Q8TEA1 469 aaKnown RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 PIGOQ8TEQ8 1089 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 EEF2KMTQ96G04 330 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 BAG1Q99933 345 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-208ENST00000641023 PKD2L1Q9P0L9 805 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 TBC1D7Q9P0N9 293 aa19.18■□□□□ 0.66
PHGDH-208ENST00000641023 IQCA1LA6NCM1 817 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 LGALS16A8MUM7 142 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 PES1O00541 588 aaKnown RBP19.17■□□□□ 0.66
PHGDH-208ENST00000641023 DHX15O43143 795 aaKnown RBP19.17■□□□□ 0.66
PHGDH-208ENST00000641023 STX10O60499 249 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 RBL2Q08999 1139 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 TRIM14Q14142 442 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 PROCA1Q8NCQ7 364 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-208ENST00000641023 GLIS3Q8NEA6 775 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 ELP3Q9H9T3 547 aa19.17■□□□□ 0.66
PHGDH-208ENST00000641023 TESPA1A2RU30 521 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 IRF6O14896 467 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 MAFGO15525 162 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 ARHGAP6O43182 974 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 TBCAO75347 108 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CCND2P30279 289 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 MTIF2P46199 727 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 DNM2P50570 870 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 GOLGA8FQ08AF8 430 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 GOLGA8DPQ0D2H9 430 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 TREML2Q5T2D2 321 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 RINT1Q6NUQ1 792 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 VSIG10LQ86VR7 867 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CNGA4Q8IV77 575 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 MB21D1Q8N884 522 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 OTUD5Q96G74 571 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 LXNQ9BS40 222 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 KCND2Q9NZV8 630 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 COL4A3BPQ9Y5P4 624 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 A0A1W2PQC6 194 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CXCL11O14625 94 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 GRIN3BO60391 1043 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 P4HBP07237 508 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 NR3C2P08235 984 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 FKBP3Q00688 224 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 ITGB3BPQ13352 177 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CHST13Q8NET6 341 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 PANX2Q96RD6 677 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 CYP39A1Q9NYL5 469 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 SAMM50Q9Y512 469 aa19.16■□□□□ 0.66
PHGDH-208ENST00000641023 COL11A1P12107 1806 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-208ENST00000641023 LBX2Q6XYB7 198 aa19.15■□□□□ 0.66
PHGDH-208ENST00000641023 NLRX1Q86UT6 975 aa19.15■□□□□ 0.66
PHGDH-208ENST00000641023 CPLX3Q8WVH0 158 aa19.15■□□□□ 0.66
PHGDH-208ENST00000641023 NOC4LQ9BVI4 516 aaKnown RBP19.15■□□□□ 0.66
PHGDH-208ENST00000641023 RUSC1Q9BVN2 902 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms