RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 TBC1D5Q92609 795 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 FRAT1Q92837 279 aaPredicted RBP9.58□□□□□ -0.88
SCARB2-226ENST00000640916 P2RX5Q93086 422 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 OSBP2Q969R2 916 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 S1PR5Q9H228 398 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 DLL3Q9NYJ7 618 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 DDX41Q9UJV9 622 aaKnown RBP9.58□□□□□ -0.88
SCARB2-226ENST00000640916 RWDD3Q9Y3V2 267 aa9.58□□□□□ -0.88
SCARB2-226ENST00000640916 CEP250Q9BV73 2442 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 ACACBO00763 2458 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 TREHO43280 583 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 ANP32CO43423 234 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 TSPY3P0CV98 308 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 TSPY8P0CW00 308 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 RLBP1P12271 317 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 KCNC3Q14003 757 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 RBM23Q86U06 439 aaKnown RBP9.57□□□□□ -0.88
SCARB2-226ENST00000640916 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 PPTC7Q8NI37 304 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 C16orf70Q9BSU1 422 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 KATNAL1Q9BW62 490 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 COL20A1Q9P218 1284 aa9.57□□□□□ -0.88
SCARB2-226ENST00000640916 MRPL42Q9Y6G3 142 aaKnown RBP9.57□□□□□ -0.88
SCARB2-226ENST00000640916 MAP1BP46821 2468 aaKnown RBP9.57□□□□□ -0.88
SCARB2-226ENST00000640916 PI15O43692 258 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 DGKIO75912 1065 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 CTSHP09668 335 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 FOSBP53539 338 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 PUM1Q14671 1186 aaKnown RBP eCLIP9.56□□□□□ -0.88
SCARB2-226ENST00000640916 FAM26DQ5JW98 314 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 SYDE2Q5VT97 1194 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 CWF19L1Q69YN2 538 aaKnown RBP9.56□□□□□ -0.88
SCARB2-226ENST00000640916 SYCE2Q6PIF2 218 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 KIAA2013Q8IYS2 634 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 CLASRPQ8N2M8 674 aaKnown RBP9.56□□□□□ -0.88
SCARB2-226ENST00000640916 KLHL23Q8NBE8 558 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 TAAR1Q96RJ0 339 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 CDH22Q9UJ99 828 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 OTOGLQ3ZCN5 2332 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 LOXHD1Q8IVV2 1947 aa9.56□□□□□ -0.88
SCARB2-226ENST00000640916 CHD6Q8TD26 2715 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 DOCK5Q9H7D0 1870 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 ENPP3O14638 875 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 PER2O15055 1255 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 CHRNA1P02708 482 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 CLCN5P51795 746 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 BTG3Q14201 252 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 HSDL1Q3SXM5 330 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 NAALADL2Q58DX5 795 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 TMEM184AQ6ZMB5 413 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 DHX37Q8IY37 1157 aaKnown RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 IFNL3Q8IZI9 196 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 RGS22Q8NE09 1264 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 DCAF4Q8WV16 495 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 POF1BQ8WVV4 589 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 LINC01599Q8WXQ3 324 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 APBB2Q92870 758 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 ATP6V0A1Q93050 837 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 RNPEPQ9H4A4 650 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 EHMT1Q9H9B1 1298 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 ZNF287Q9HBT7 754 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 LHX6Q9UPM6 363 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 FNDC1Q4ZHG4 1894 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 FRMPD2Q68DX3 1309 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-226ENST00000640916 KAT6AQ92794 2004 aa9.55□□□□□ -0.88
SCARB2-226ENST00000640916 C17orf102A2RUQ5 167 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 M0R2C6 588 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 CAND2O75155 1236 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 NPR3P17342 541 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 SP100P23497 879 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-226ENST00000640916 MLLT3P42568 568 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-226ENST00000640916 ADAM17P78536 824 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 SP2Q02086 613 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 LAMC2Q13753 1193 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 DUSP6Q16828 381 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 RTN4RL1Q86UN2 441 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-226ENST00000640916 SIRT2Q8IXJ6 389 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 UBALD2Q8IYN6 164 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 SYTL5Q8TDW5 730 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-226ENST00000640916 KIF1BPQ96EK5 621 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 MPHOSPH6Q99547 160 aaKnown RBP9.54□□□□□ -0.88
SCARB2-226ENST00000640916 TLE6Q9H808 572 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 SORCS3Q9UPU3 1222 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 WDR19Q8NEZ3 1342 aa9.54□□□□□ -0.88
SCARB2-226ENST00000640916 MYH6P13533 1939 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 C2CD4DB7Z1M9 353 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
SCARB2-226ENST00000640916 GPAA1O43292 621 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 SORBS3O60504 671 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 LMNAP02545 664 aaKnown RBP9.53□□□□□ -0.88
SCARB2-226ENST00000640916 SMIM10L2AP0DMW4 78 aa9.53□□□□□ -0.88
SCARB2-226ENST00000640916 SMIM10L2BP0DMW5 78 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms