RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 BATF3Q9NR55 127 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
SPIN3-236ENST00000640131 FOCADQ5VW36 1801 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 TCP10L2B9ZVM9 353 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 MFAP3LO75121 409 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 ECM1Q16610 540 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 ASPRV1Q53RT3 343 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 STX10O60499 249 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 RAD17O75943 681 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 STAT3P40763 770 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 GALNT17Q6IS24 598 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 CSGALNACT2Q8N6G5 542 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 SCLT1Q96NL6 688 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 CHP1Q99653 195 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 SLF1Q9BQI6 1058 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 KBTBD4Q9NVX7 518 aa13.62□□□□□ -0.23
SPIN3-236ENST00000640131 ZEB2O60315 1214 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PRPF6O94906 941 aaKnown RBP13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PAX3P23760 479 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 KRT9P35527 623 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 GRB10Q13322 594 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 EZH2Q15910 746 aaKnown RBP13.61□□□□□ -0.23
SPIN3-236ENST00000640131 QRICH1Q2TAL8 776 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 CCSER1Q9C0I3 900 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 EHD4Q9H223 541 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 IGKV6D-41A0A0C4DH26 115 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 MYMKA6NI61 221 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
SPIN3-236ENST00000640131 MYO1BO43795 1136 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 RASSF9O75901 435 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PBX1P40424 430 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 ERVK-24P63145 666 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 CCDC84Q86UT8 332 aaPredicted RBP13.61□□□□□ -0.23
SPIN3-236ENST00000640131 CDAN1Q8IWY9 1227 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 YIPF3Q9GZM5 350 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 ZHX3Q9H4I2 956 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PSTPIP2Q9H939 334 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 TRIM10Q9UDY6 481 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PCDHA1Q9Y5I3 950 aa13.61□□□□□ -0.23
SPIN3-236ENST00000640131 PNMA6FA0A0J9YX94 578 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 NPHP3-ACAD11A0A0J9YXS1 232 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 PSMA7O14818 248 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 MEFVO15553 781 aaPredicted RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 SYF2O95926 243 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 HOXA13P31271 388 aaPredicted RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 ARHGAP25P42331 645 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 DACT2Q5SW24 774 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 SLC30A9Q6PML9 568 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 B4GALNT4Q76KP1 1039 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 PRMT6Q96LA8 375 aaPredicted RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 CTAGE1Q96RT6 745 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 YIPF2Q9BWQ6 316 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 PPIP5K2O43314 1243 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 GH2P01242 217 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 RRP1BQ14684 758 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 KIAA0895Q8NCT3 520 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 GBP3Q9H0R5 595 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 KANSL2Q9H9L4 492 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 ATXN2Q99700 1313 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 MTIF2P46199 727 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 STIM1Q13586 685 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 CDC37Q16543 378 aaPredicted RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 GIMAP8Q8ND71 665 aaPredicted RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 CUL5Q93034 780 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 EPAS1Q99814 870 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 DUSP9Q99956 384 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 SLC40A1Q9NP59 571 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 BLOC1S4Q9NUP1 217 aa13.6□□□□□ -0.23
SPIN3-236ENST00000640131 LIMA1Q9UHB6 759 aaKnown RBP13.6□□□□□ -0.23
SPIN3-236ENST00000640131 TTC26A0AVF1 554 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 SPDYE3A6NKU9 549 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 ZBTB5O15062 677 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 CCDC175P0C221 793 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 SNHG28P0DPA3 235 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 HHIPL2Q6UWX4 724 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 TRIM42Q8IWZ5 723 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 ABHD10Q9NUJ1 306 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 MAGEC2Q9UBF1 373 aaPredicted RBP13.59□□□□□ -0.23
SPIN3-236ENST00000640131 E9PMD0 336 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 AHCYL1O43865 530 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 UBXN2AP68543 259 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 TMEM266Q2M3C6 531 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 ZNF569Q5MCW4 686 aa13.59□□□□□ -0.23
SPIN3-236ENST00000640131 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms