RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 PRKACBP22694 351 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 RUNX1T1Q06455 604 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
NECAP1-222ENST00000640072 TAF12Q16514 161 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 SLC10A5Q5PT55 438 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 PHLDB3Q6NSJ2 640 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 SYT2Q8N9I0 419 aaPredicted RBP6.67□□□□□ -1.34
NECAP1-222ENST00000640072 FATE1Q969F0 183 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 GIMAP5Q96F15 307 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 ACSBG1Q96GR2 724 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 SNX27Q96L92 541 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 SEC62Q99442 399 aaKnown RBP6.67□□□□□ -1.34
NECAP1-222ENST00000640072 EHD4Q9H223 541 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 RRP7BPQ9NSQ0 103 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 SH3BGRL2Q9UJC5 107 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 DSEQ9UL01 958 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 PHF24Q9UPV7 400 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 CHMP2BQ9UQN3 213 aa6.67□□□□□ -1.34
NECAP1-222ENST00000640072 FMN1Q68DA7 1419 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CTAGE15A4D2H0 777 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 MAP3K6O95382 1288 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 APOEP02649 317 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CTAGE8P0CG41 777 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 FOXK1P85037 733 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 LMNB2Q03252 620 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 DIXDC1Q155Q3 683 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ANKDD1AQ495B1 522 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PCNX4Q63HM2 1172 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CTAGE6Q86UF2 777 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CTAGE4Q8IX94 777 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 THAP11Q96EK4 314 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 GBP5Q96PP8 586 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 AIPL1Q9NZN9 384 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 SUCLA2Q9P2R7 463 aaPredicted RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ZNF180Q9UJW8 692 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TNNQ9UQP3 1299 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TMEM5Q9Y2B1 443 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TSC22D4Q9Y3Q8 395 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 L3MBTL1Q9Y468 752 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ZMYM4Q5VZL5 1548 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CDHR2Q9BYE9 1310 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PI4K2BG5E9Z4 385 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 NCAM2O15394 837 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 MAP3K7O43318 606 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PDHA1P08559 390 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CD86P42081 329 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PLCD1P51178 756 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 MAP3K7CLP57077 242 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 EXOSC9Q06265 439 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 DALRD3Q5D0E6 543 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 RUFY3Q7L099 469 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 LPCAT2Q7L5N7 544 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 SRGAP1Q7Z6B7 1085 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 METTL3Q86U44 580 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ENAHQ8N8S7 591 aaPredicted RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PI4K2BQ8TCG2 481 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 NUDT16L1Q9BRJ7 211 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 NUP58Q9BVL2 599 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 MXD3Q9BW11 206 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ADNPQ9H2P0 1102 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 XAB2Q9HCS7 855 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PFDN4Q9NQP4 134 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 DDX19AQ9NUU7 478 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PCDHB13Q9Y5F0 798 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PARP3Q9Y6F1 533 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ADAMTS12P58397 1594 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 A0A1B0GVL5 298 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 CYTH3O43739 400 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TMCC2O75069 709 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 FBXO21O94952 628 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 INHBCP55103 352 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 MYL6P60660 151 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ARID5AQ03989 594 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 RALGDSQ12967 914 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 PDCLQ13371 301 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 P3H1Q32P28 736 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TUBA3EQ6PEY2 450 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 C1orf228Q6PIY5 440 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 KDELC1Q6UW63 502 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 Q6ZUG5 572 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 METTL16Q86W50 562 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 EHBP1Q8NDI1 1231 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 DEPTORQ8TB45 409 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 RIN2Q8WYP3 895 aaPredicted RBP6.66□□□□□ -1.34
NECAP1-222ENST00000640072 OSBP2Q969R2 916 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 NCLNQ969V3 563 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 XAGE2Q96GT9 111 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 GMLQ99445 158 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 DACT1Q9NYF0 836 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 IMPACTQ9P2X3 320 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 STAG3Q9UJ98 1225 aa6.66□□□□□ -1.34
NECAP1-222ENST00000640072 ATAD2Q6PL18 1390 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 PDLIM1O00151 329 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 APBB3O95704 486 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 UBL4AP11441 157 aa6.65□□□□□ -1.34
NECAP1-222ENST00000640072 CACNB2Q08289 660 aaPredicted RBP6.65□□□□□ -1.34
NECAP1-222ENST00000640072 STK32CQ86UX6 486 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms