RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 RAPGEF5Q92565 580 aa7.77□□□□□ -1.17
NECAP1-213ENST00000638883 MAP4K1Q92918 833 aa7.77□□□□□ -1.17
NECAP1-213ENST00000638883 PAGR1Q9BTK6 254 aa7.77□□□□□ -1.17
NECAP1-213ENST00000638883 DMAP1Q9NPF5 467 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-213ENST00000638883 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
NECAP1-213ENST00000638883 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
NECAP1-213ENST00000638883 MAGEC2Q9UBF1 373 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-213ENST00000638883 GNEQ9Y223 722 aaKnown RBP7.77□□□□□ -1.17
NECAP1-213ENST00000638883 ATAD5Q96QE3 1844 aa7.77□□□□□ -1.17
NECAP1-213ENST00000638883 NAV1Q8NEY1 1877 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 HOXA2O43364 376 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 ZPR1O75312 459 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 NPTXRO95502 500 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CYP11B2P19099 503 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 KCNA3P22001 575 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 MAGOHP61326 146 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CHRNA2Q15822 529 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 EPHA10Q5JZY3 1008 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 C6orf89Q6UWU4 347 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 NSUN7Q8NE18 718 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TAF4BQ92750 862 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 MAGOHBQ96A72 148 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 EAF2Q96CJ1 260 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TRIM11Q96F44 468 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SUCLG2Q96I99 432 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CCDC42Q96M95 316 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 NR1H4Q96RI1 486 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CCDC8Q9H0W5 538 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 QTRT2Q9H974 415 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CCDC87Q9NVE4 849 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 INTS13Q9NVM9 706 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 USP21Q9UK80 565 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SCN9AQ15858 1988 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 OTOFQ9HC10 1997 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 A6NHS1 94 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 H7C1W4 665 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 RNMTO43148 476 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TRAPPC3O43617 180 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 FXR1P51114 621 aaKnown RBP eCLIP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 KCNJ2P63252 427 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 POSTNQ15063 836 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SEPT7Q16181 437 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SPRED3Q2MJR0 410 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 P3H1Q32P28 736 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TTC39AQ5SRH9 613 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 BRINP3Q76B58 766 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CHST3Q7LGC8 479 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 KLHL7Q8IXQ5 586 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TRIML1Q8N9V2 468 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 ATP11CQ8NB49 1132 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SYNRGQ9UMZ2 1314 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 HNRNPRO43390 633 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 AKR1B10O60218 316 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 GSTA1P08263 222 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 ZNF24P17028 368 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TCP1P17987 556 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 MSH2P43246 934 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 BAG6P46379 1132 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TMEM62Q0P6H9 643 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TRIM14Q14142 442 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 SAFBQ15424 915 aaKnown RBP eCLIP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CFAP221Q4G0U5 840 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 LACTB2Q53H82 288 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 DDX46Q7L014 1031 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 DDX17Q92841 729 aaKnown RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 CNKSR1Q969H4 720 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 ZDHHC16Q969W1 377 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 NUDCD1Q96RS6 583 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 NACA2Q9H009 215 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 PCMTD2Q9NV79 361 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TAB2Q9NYJ8 693 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 C9orf78Q9NZ63 289 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TMCO1Q9UM00 188 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 TFR2Q9UP52 801 aa7.76□□□□□ -1.17
NECAP1-213ENST00000638883 PSMD14O00487 310 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 IGKV5-2P06315 115 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 GSTA2P09210 222 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 EIF4BP23588 611 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 CARSP49589 748 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 USP46P62068 366 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 CTDSPL2Q05D32 466 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 SFMBT2Q5VUG0 894 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 INTS8Q75QN2 995 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 ABHD10Q9NUJ1 306 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 INTS9Q9NV88 658 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 POLR2DO15514 142 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 SUN1O94901 812 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 GCP02774 474 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 MMEP08473 750 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 TROVE2P10155 538 aaKnown RBP eCLIP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 GNAT2P19087 354 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 CDC25AP30304 524 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 ADD1P35611 737 aaKnown RBP7.75□□□□□ -1.17
NECAP1-213ENST00000638883 COG7P83436 770 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 PDE4BQ07343 736 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 SPAG1Q07617 926 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 ADAM9Q13443 819 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 BIRC3Q13489 604 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 NR1I3Q14994 352 aa7.75□□□□□ -1.17
NECAP1-213ENST00000638883 ZNF772Q68DY9 489 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms