RNA–Protein interactions for RNA: ENST00000637243.1

CHRNA4-218, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 85 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-218ENST00000637243 RPGRIP1Q96KN7 1286 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 RIPOR3Q96MK2 946 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 CNTNAP3BQ96NU0 1288 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 C16orf70Q9BSU1 422 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 PHF7Q9BWX1 381 aaPredicted RBP6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 CNTNAP3Q9BZ76 1288 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 S1PR5Q9H228 398 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 MRPL42Q9Y6G3 142 aaKnown RBP6.88□□□□□ -1.31
CHRNA4-218ENST00000637243 FNDC1Q4ZHG4 1894 aaPredicted RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 CHD8Q9HCK8 2581 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 EMSYQ7Z589 1322 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 ADGRA3Q8IWK6 1321 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 OPLAHO14841 1288 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 RNF113AO15541 343 aaKnown RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 BRD1O95696 1058 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 CHRNA1P02708 482 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 MCM4P33991 863 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 NRIP1P48552 1158 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 TDO2P48775 406 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 PPARAQ07869 468 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 RABEP1Q15276 862 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 CCDC96Q2M329 555 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 MYSM1Q5VVJ2 828 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 CLEC17AQ6ZS10 378 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 RBM23Q86U06 439 aaKnown RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 KBTBD3Q8NAB2 608 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 IL31RAQ8NI17 732 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 PPTC7Q8NI37 304 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 DCAF4Q8WV16 495 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 SEPT8Q92599 483 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 APPBP2Q92624 585 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 KIF2CQ99661 725 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 TMEM47Q9BQJ4 181 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 C11orf84Q9BUA3 381 aaPredicted RBP6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 STX8Q9UNK0 236 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 FANCMQ8IYD8 2048 aa6.87□□□□□ -1.31
CHRNA4-218ENST00000637243 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 GPR179Q6PRD1 2367 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 K7ELQ4 463 aaPredicted RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 ENPP3O14638 875 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 PER2O15055 1255 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 PI15O43692 258 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 KDM4AO75164 1064 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 DGKIO75912 1065 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 FGRP09769 529 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SMIM10L2AP0DMW4 78 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SMIM10L2BP0DMW5 78 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SNHG28P0DPA3 235 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 PDHBP11177 359 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 GSPT1P15170 499 aaKnown RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 ATF7P17544 494 aaPredicted RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SP100P23497 879 aaPredicted RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 GATMP50440 423 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 MGAT3Q09327 533 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 FAM26DQ5JW98 314 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 ZSCAN25Q6NSZ9 544 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SYCE2Q6PIF2 218 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 KREMEN2Q8NCW0 462 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 RGS22Q8NE09 1264 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 GBP4Q96PP9 640 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 IRF2BPLQ9H1B7 796 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 SLKQ9H2G2 1235 aaPredicted RBP6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 EHMT1Q9H9B1 1298 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 HCSTQ9UBK5 93 aa6.86□□□□□ -1.31
CHRNA4-218ENST00000637243 DENND4AQ7Z401 1863 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 SALL3Q9BXA9 1300 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 REC8O95072 547 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 EIF2AK2P19525 551 aaKnown RBP6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 NUBP1P53384 320 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 LAMC2Q13753 1193 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 LPIN1Q14693 890 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 SKOR2Q2VWA4 1001 aaPredicted RBP6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 USH1GQ495M9 461 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 HSP90AB4PQ58FF6 505 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 CELF3Q5SZQ8 465 aaKnown RBP6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 VPS53Q5VIR6 699 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 CWF19L1Q69YN2 538 aaKnown RBP6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 KLHL23Q8NBE8 558 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 POF1BQ8WVV4 589 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 ATP6V0A1Q93050 837 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 P2RX5Q93086 422 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 NKD2Q969F2 451 aaPredicted RBP6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 KATNAL1Q9BW62 490 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 SETD4Q9NVD3 440 aa6.85□□□□□ -1.31
CHRNA4-218ENST00000637243 KAT6AQ92794 2004 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 FRYQ5TBA9 3013 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 FSD2A1L4K1 749 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 C17orf102A2RUQ5 167 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 TSPY2A6NKD2 308 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 C2CD4DB7Z1M9 353 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 ORC4O43929 436 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 RAB11FIP3O75154 756 aa6.84□□□□□ -1.31
CHRNA4-218ENST00000637243 PPFIA4O75335 1185 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 718.6 ms