RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 TPH2Q8IWU9 490 aa20.89■□□□□ 0.93
CLN5-216ENST00000636780 LSM14BQ9BX40 385 aaKnown RBP20.89■□□□□ 0.93
CLN5-216ENST00000636780 ARFGEF1Q9Y6D6 1849 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 CASP4P49662 377 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 USP11P51784 963 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 FKBP3Q00688 224 aaKnown RBP20.88■□□□□ 0.93
CLN5-216ENST00000636780 CC2D2BQ6DHV5 1058 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 IFIH1Q9BYX4 1025 aaKnown RBP20.88■□□□□ 0.93
CLN5-216ENST00000636780 PLAGL2Q9UPG8 496 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 PCDHA13Q9Y5I0 950 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 ZC2HC1CQ53FD0 456 aaPredicted RBP20.88■□□□□ 0.93
CLN5-216ENST00000636780 STYK1Q6J9G0 422 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 TRAPPC11Q7Z392 1133 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 CEP112Q8N8E3 955 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 COG1Q8WTW3 980 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 TSG101Q99816 390 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 NUP58Q9BVL2 599 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 KCTD10Q9H3F6 313 aa20.88■□□□□ 0.93
CLN5-216ENST00000636780 EGFRP00533 1210 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 GCFC2P16383 781 aaKnown RBP20.87■□□□□ 0.93
CLN5-216ENST00000636780 C2orf54Q08AI8 447 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 ORC2Q13416 577 aaPredicted RBP20.87■□□□□ 0.93
CLN5-216ENST00000636780 PLS1Q14651 629 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 NBPF9Q3BBW0 867 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 CCDC65Q8IXS2 484 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 FZD1Q9UP38 647 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 H3BQF6 201 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 SLC9A1P19634 815 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 KRT83P78385 493 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 LRRC63Q05C16 580 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 DEFB132Q7Z7B7 95 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 WRAP73Q9P2S5 460 aaPredicted RBP20.87■□□□□ 0.93
CLN5-216ENST00000636780 ZNF70Q9UC06 446 aaPredicted RBP20.87■□□□□ 0.93
CLN5-216ENST00000636780 SAR1BQ9Y6B6 198 aa20.87■□□□□ 0.93
CLN5-216ENST00000636780 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 EIF3CLB5ME19 914 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 KRT86O43790 486 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 IPO7O95373 1038 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 NR2F2P24468 414 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 NEK11Q8NG66 645 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 EIF3CQ99613 913 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 PHACTR2O75167 634 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 OAS2P29728 719 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 RNASE9P60153 205 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 KIF5AQ12840 1032 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 SPA17Q15506 151 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 NFRKBQ6P4R8 1299 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 GJB7Q6PEY0 223 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 EIF2AK1Q9BQI3 630 aaKnown RBP20.86■□□□□ 0.93
CLN5-216ENST00000636780 PACSIN1Q9BY11 444 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 NT5C3AQ9H0P0 336 aa20.86■□□□□ 0.93
CLN5-216ENST00000636780 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLN5-216ENST00000636780 NMT1P30419 496 aaKnown RBP20.85■□□□□ 0.93
CLN5-216ENST00000636780 STAT2P52630 851 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 NAP1L1P55209 391 aaKnown RBP20.85■□□□□ 0.93
CLN5-216ENST00000636780 SMC1AQ14683 1233 aaKnown RBP20.85■□□□□ 0.93
CLN5-216ENST00000636780 COG2Q14746 738 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 DCAF17Q5H9S7 520 aaPredicted RBP20.85■□□□□ 0.93
CLN5-216ENST00000636780 FAM133AQ8N9E0 248 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 GOLPH3Q9H4A6 298 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 HOMER2Q9NSB8 354 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 PACSIN2Q9UNF0 486 aaPredicted RBP20.85■□□□□ 0.93
CLN5-216ENST00000636780 DNM3Q9UQ16 869 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 CYP3A7-CYP3A51PA0A087WV96 503 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 ARP10275 920 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 CYP3A7P24462 503 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 DLGAP5Q15398 846 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 HDAC7Q8WUI4 952 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 DYDC2Q96IM9 177 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 AGBL1Q96MI9 1066 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.85■□□□□ 0.93
CLN5-216ENST00000636780 VAV3Q9UKW4 847 aa20.85■□□□□ 0.93
CLN5-216ENST00000636780 RAPGEF1Q13905 1077 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 BEND6Q5SZJ8 279 aaPredicted RBP20.84■□□□□ 0.93
CLN5-216ENST00000636780 HYIQ5T013 277 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 TCERG1LQ5VWI1 586 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 HGSNATQ68CP4 663 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 GMCL1P1Q8NEA9 526 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 FLAD1Q8NFF5 587 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 GMCL1Q96IK5 515 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 PURBQ96QR8 312 aaKnown RBP20.84■□□□□ 0.93
CLN5-216ENST00000636780 MYH10P35580 1976 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 SREBF1P36956 1147 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 VAV2P52735 878 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 COBLL1Q53SF7 1204 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 CAGE1Q8TC20 777 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 SECISBP2LQ93073 1101 aaKnown RBP20.84■□□□□ 0.93
CLN5-216ENST00000636780 MS4A14Q96JA4 679 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 PDE11AQ9HCR9 933 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 PCDHB13Q9Y5F0 798 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 QSER1Q2KHR3 1735 aa20.84■□□□□ 0.93
CLN5-216ENST00000636780 GCNT3O95395 438 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 MYBL2P10244 700 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 MAGEA1P43355 309 aa20.83■□□□□ 0.93
CLN5-216ENST00000636780 KCNH2Q12809 1159 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms