RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ADD3Q9UEY8 706 aaKnown RBP19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 KBTBD3Q8NAB2 608 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 FSD1LQ9BXM9 530 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 DCTPP1Q9H773 170 aa19.26■□□□□ 0.67
CACNA1A-227ENST00000636549 DFFAO00273 331 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 PRKAB2O43741 272 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 LRRC23Q53EV4 343 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SMAP1Q8IYB5 467 aaPredicted RBP19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 MAGOHBQ96A72 148 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 CAPN11Q9UMQ6 739 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 NEURL1BA8MQ27 555 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 DNAJC24Q6P3W2 148 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 DYRK4Q9NR20 520 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 HEY1Q9Y5J3 304 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SAR1BQ9Y6B6 198 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 CTSHP09668 335 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 TMEM62Q0P6H9 643 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 MAP7D3Q8IWC1 876 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SPON2Q9BUD6 331 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 ZHX2Q9Y6X8 837 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 RALGAPBQ86X10 1494 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 HDLBPQ00341 1268 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 MLKLQ8NB16 471 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 COL4A3BPQ9Y5P4 624 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SYDE2Q5VT97 1194 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 CNOT6LQ96LI5 555 aaKnown RBP19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 SIK2Q9H0K1 926 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 A2MP01023 1474 aa19.25■□□□□ 0.67
CACNA1A-227ENST00000636549 MYO1FO00160 1098 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 SCG2P13521 617 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 MSH2P43246 934 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 E5RI56 91 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 FTCDO95954 541 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 ASIC4Q96FT7 647 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 NR2F2P24468 414 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 PTH1RQ03431 593 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 PDCD2Q16342 344 aaPredicted RBP19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 ME3Q16798 604 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 TMTC1Q8IUR5 882 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 ABCB11O95342 1321 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 CCDC78A2IDD5 438 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 C2CD2LO14523 706 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 PYGLP06737 847 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 PEX3P56589 373 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 POU5F1BQ06416 359 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 GOLGA5Q8TBA6 731 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 STAG1Q8WVM7 1258 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 USP28Q96RU2 1077 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 GTSE1Q9NYZ3 720 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 NDUFB5O43674 189 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 KRT26Q7Z3Y9 468 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 EGFL8Q99944 293 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 RASSF4Q9H2L5 321 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 NGRNQ9NPE2 291 aaKnown RBP19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 PPP1R9AQ9ULJ8 1098 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 A0A0D9SFI3 127 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 TMTC3Q6ZXV5 915 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 AP1M1Q9BXS5 423 aa19.24■□□□□ 0.67
CACNA1A-227ENST00000636549 TRPC5Q9UL62 973 aaPredicted RBP19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 BTBD18B2RXH4 712 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 TTLL1O95922 423 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 ACCSQ96QU6 501 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 SENP1Q9P0U3 644 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 KDM2BQ8NHM5 1336 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 EIF4E1BA6NMX2 242 aaKnown RBP19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 USP14P54578 494 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 CIAPIN1Q6FI81 312 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 WRNIP1Q96S55 665 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 KLF15Q9UIH9 416 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 SMIM5Q71RC9 77 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 FAF2Q96CS3 445 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 CHAMP1Q96JM3 812 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 KIF17Q9P2E2 1029 aa19.23■□□□□ 0.67
CACNA1A-227ENST00000636549 CC2D1AQ6P1N0 951 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 POLR3CQ9BUI4 534 aaPredicted RBP19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 ATP8A1Q9Y2Q0 1164 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 LCP1P13796 627 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 SIK1P57059 783 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 LRRD1A4D1F6 860 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 GSPT1P15170 499 aaKnown RBP19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 CYFIP1Q7L576 1253 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 ATP6V0A1Q93050 837 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 SLC7A5Q01650 507 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 AP1B1Q10567 949 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 EFCAB13Q8IY85 973 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 SMYD3Q9H7B4 428 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 BABAM1Q9NWV8 329 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 TMEM247A6NEH6 219 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 PLTPP55058 493 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 FAM83BQ5T0W9 1011 aa19.22■□□□□ 0.67
CACNA1A-227ENST00000636549 BCAP29Q9UHQ4 241 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms