RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 BARHL2Q9NY43 387 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 RRP15Q9Y3B9 282 aaKnown RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 TNS1Q9HBL0 1735 aaKnown RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 CCDC194A0A1B0GVG4 234 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 KRT86O43790 486 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 PHACTR2O75167 634 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 PLCG1P19174 1290 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 VAV2P52735 878 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 HSP90B2PQ58FF3 399 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 PLA2G2CQ5R387 149 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 KIAA1328Q86T90 577 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 BPHLQ86WA6 291 aaPredicted RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 CREG2Q8IUH2 290 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 CNOT6LQ96LI5 555 aaKnown RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 AK8Q96MA6 479 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 PLIN2Q99541 437 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 MMTAG2Q9BU76 263 aaKnown RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 TRIM9Q9C026 710 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 SAP130Q9H0E3 1048 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 TCP11L1Q9NUJ3 509 aa6.93□□□□□ -1.3
GABRA1-213ENST00000636340 MAGEC2Q9UBF1 373 aaPredicted RBP6.93□□□□□ -1.3
GABRA1-213ENST00000636340 COL5A3P25940 1745 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 BICDL2A1A5D9 508 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 LCA5LO95447 670 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TRIM21P19474 475 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 WEE1P30291 646 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 HIBADHP31937 336 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 GNAQP50148 359 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 CYP27A1Q02318 531 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TXNRD1Q16881 649 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 MAP9Q49MG5 647 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 CABP7Q86V35 215 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 MMGT1Q8N4V1 131 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 KIAA0895Q8NCT3 520 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 AENQ8WTP8 325 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 CAPZA3Q96KX2 299 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SLC6A16Q9GZN6 736 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SEMA6BQ9H3T3 888 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 MCM9Q9NXL9 1143 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TFCP2L1Q9NZI6 479 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SNX12Q9UMY4 172 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 ZNF652Q9Y2D9 606 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SIK3Q9Y2K2 1263 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 MYH1P12882 1939 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TMEM229AB2RXF0 380 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 EPHB6O15197 1021 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SHOX2O60902 331 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 RECKO95980 971 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 PLEKP08567 350 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 OR52Z1P0C646 297 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 FCER1AP12319 257 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 PRLRP16471 622 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 ITIH3Q06033 890 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TJAP1Q5JTD0 557 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TXNRD3Q86VQ6 643 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 GSPT2Q8IYD1 628 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 C1orf216Q8TAB5 229 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 AFAP1L1Q8TED9 768 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 RIN2Q8WYP3 895 aaPredicted RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 DYNLL2Q96FJ2 89 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 EEF2KMTQ96G04 330 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 NOC4LQ9BVI4 516 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 SELENOOQ9BVL4 669 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TSGA10Q9BZW7 698 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 ZMYND12Q9H0C1 365 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 ZNHIT6Q9NWK9 470 aaKnown RBP6.92□□□□□ -1.3
GABRA1-213ENST00000636340 ARHGAP20Q9P2F6 1191 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 LRWD1Q9UFC0 647 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 PLAGL2Q9UPG8 496 aa6.92□□□□□ -1.3
GABRA1-213ENST00000636340 PES1O00541 588 aaKnown RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 C21orf2O43822 256 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 IDEP14735 1019 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 GGCXP38435 758 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 PPP1R2P41236 205 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 TNNT3P45378 269 aaPredicted RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 RPS8P62241 208 aaKnown RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 C2orf54Q08AI8 447 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 KIF5AQ12840 1032 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 EZH2Q15910 746 aaKnown RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 CENPPQ6IPU0 288 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 KRT26Q7Z3Y9 468 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 HEATR3Q7Z4Q2 680 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 FAM114A1Q8IWE2 563 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 C10orf67Q8IYJ2 551 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 RASSF8Q8NHQ8 419 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SMCR8Q8TEV9 937 aaPredicted RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 HDAC7Q8WUI4 952 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SECISBP2LQ93073 1101 aaKnown RBP6.91□□□□□ -1.3
GABRA1-213ENST00000636340 HPS3Q969F9 1004 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 IQCDQ96DY2 449 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 TMEM47Q9BQJ4 181 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 SH2D4AQ9H788 454 aa6.91□□□□□ -1.3
GABRA1-213ENST00000636340 LRRC4BQ9NT99 713 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms