RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 BIN2Q9UBW5 565 aaPredicted RBP17.3■□□□□ 0.36
CLN8-209ENST00000635970 PCDHA5Q9Y5H7 936 aa17.3■□□□□ 0.36
CLN8-209ENST00000635970 CCDC151A5D8V7 595 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 STXBP3O00186 592 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 HMGCRP04035 888 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 SCG2P13521 617 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 ZNF18P17022 549 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 MDM2Q00987 491 aaPredicted RBP17.29■□□□□ 0.36
CLN8-209ENST00000635970 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
CLN8-209ENST00000635970 SLC5A4Q9NY91 659 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 ERICH4A6NGS2 130 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 NAPAP54920 295 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 AKAP17AQ02040 695 aaKnown RBP17.29■□□□□ 0.36
CLN8-209ENST00000635970 SSRP1Q08945 709 aaKnown RBP17.29■□□□□ 0.36
CLN8-209ENST00000635970 LONRF3Q496Y0 759 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 SHISA4Q96DD7 197 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 AIFM3Q96NN9 605 aa17.29■□□□□ 0.36
CLN8-209ENST00000635970 FRMPD3Q5JV73 1810 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 IGHA2P01877 340 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 ERCC5P28715 1186 aaPredicted RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 HSD17B4P51659 736 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 TRAF1Q13077 416 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 SMC1AQ14683 1233 aaKnown RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 MTFR1Q15390 333 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 ISM2Q6H9L7 571 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 MCF2L2Q86YR7 1114 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 SYTL5Q8TDW5 730 aaPredicted RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 HNRNPLLQ8WVV9 542 aaKnown RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 ZNF333Q96JL9 665 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 PANX2Q96RD6 677 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 DIS3Q9Y2L1 958 aaKnown RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 TUBBP07437 444 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 TXLNAP40222 546 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 SARSP49591 514 aaKnown RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
CLN8-209ENST00000635970 USP17L6PQ6QN14 398 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 TC2NQ8N9U0 490 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 ARMC5Q96C12 935 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 ABHD8Q96I13 439 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 TINF2Q9BSI4 451 aa17.28■□□□□ 0.36
CLN8-209ENST00000635970 FANCGO15287 622 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 CCDC175P0C221 793 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
CLN8-209ENST00000635970 HNRNPH2P55795 449 aaKnown RBP17.27■□□□□ 0.36
CLN8-209ENST00000635970 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
CLN8-209ENST00000635970 GHRHRQ02643 423 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 POSTNQ15063 836 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLN8-209ENST00000635970 UBE2SQ16763 222 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 EXOC4Q96A65 974 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 TAAR1Q96RJ0 339 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 INTS13Q9NVM9 706 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 TMEM51Q9NW97 253 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
CLN8-209ENST00000635970 DEXIO95424 95 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 ALDH5A1P51649 535 aaPredicted RBP17.26■□□□□ 0.35
CLN8-209ENST00000635970 RILPL1Q5EBL4 403 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 PRAMEF19Q5SWL8 479 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
CLN8-209ENST00000635970 CEP112Q8N8E3 955 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 SMARCE1Q969G3 411 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
CLN8-209ENST00000635970 CEP131Q9UPN4 1083 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
CLN8-209ENST00000635970 MEIS2O14770 477 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 MORC3Q14149 939 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 NR1I3Q14994 352 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 ARMCX2Q7L311 632 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 NOSTRINQ8IVI9 506 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 TRPV1Q8NER1 839 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 UNC93B1Q9H1C4 597 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 PSTPIP2Q9H939 334 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 MAN1B1Q9UKM7 699 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 NFE2L3Q9Y4A8 694 aa17.26■□□□□ 0.35
CLN8-209ENST00000635970 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 hCG_1984214I3L0E3 225 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 SNAI1O95863 264 aaPredicted RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 OAS2P29728 719 aaKnown RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 UBXN2AP68543 259 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 MAP3K21Q5TCX8 1036 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 MFSD14CQ5VZR4 134 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 PPP1R18Q6NYC8 613 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 MAMDC4Q6UXC1 1216 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 ZNF467Q7Z7K2 595 aaPredicted RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 PDILTQ8N807 584 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 ZNF713Q8N859 430 aaPredicted RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 WDR24Q96S15 920 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 PARD6BQ9BYG5 372 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 FOXP1Q9H334 677 aaPredicted RBP17.25■□□□□ 0.35
CLN8-209ENST00000635970 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
CLN8-209ENST00000635970 SYNGAP1Q96PV0 1343 aa17.24■□□□□ 0.35
CLN8-209ENST00000635970 A0A1B0GTH6 734 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms