RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 PCNX4Q63HM2 1172 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 RINT1Q6NUQ1 792 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 POTEGQ6S5H5 508 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 POTEEQ6S8J3 1075 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 RAD9BQ6WBX8 426 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 LRRC55Q6ZSA7 311 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 C1orf186Q6ZWK4 172 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 CCDC84Q86UT8 332 aaPredicted RBP6.17□□□□□ -1.42
NEK3-211ENST00000629912 SYTL5Q8TDW5 730 aaPredicted RBP6.17□□□□□ -1.42
NEK3-211ENST00000629912 SCFD1Q8WVM8 642 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 KLRG1Q96E93 195 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 DNAJC7Q99615 494 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 ZNF577Q9BSK1 485 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 NOC4LQ9BVI4 516 aaKnown RBP6.17□□□□□ -1.42
NEK3-211ENST00000629912 TEKT3Q9BXF9 490 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 TTYH3Q9C0H2 523 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 KCTD10Q9H3F6 313 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 L2HGDHQ9H9P8 463 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 JADE2Q9NQC1 790 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 PICK1Q9NRD5 415 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 ABHD10Q9NUJ1 306 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 KCND2Q9NZV8 630 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 COL4A3BPQ9Y5P4 624 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 ADGRG1Q9Y653 693 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 ZNF541Q9H0D2 1346 aa6.17□□□□□ -1.42
NEK3-211ENST00000629912 NPHP3-ACAD11A0A0J9YXS1 232 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 B4DLN1 442 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 IPO5O00410 1097 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 TRAF5O00463 557 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 VWA5AO00534 786 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 NFIBO00712 420 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 PDXKO00764 312 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 CETN3O15182 167 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 MAFGO15525 162 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 DHX15O43143 795 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 GAS7O60861 476 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 USP2O75604 605 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 FLOT1O75955 427 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 LYPLA2O95372 231 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 KRT18P05783 430 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 ALAS1P13196 640 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 ITGB5P18084 799 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 VCAM1P19320 739 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 HIRAP54198 1017 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 MRPS9P82933 396 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 PPP2R3AQ06190 1150 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 PABPC4Q13310 644 aaKnown RBP eCLIP6.16□□□□□ -1.42
NEK3-211ENST00000629912 TUBB2AQ13885 445 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 COG2Q14746 738 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 LRRC41Q15345 812 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 MEA1Q16626 185 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 NFIL3Q16649 462 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 KNOP1Q1ED39 458 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 MUM1L1Q5H9M0 696 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 FKBP15Q5T1M5 1219 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 ANGEL2Q5VTE6 544 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 SYT10Q6XYQ8 523 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 CATSPERGQ6ZRH7 1159 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TOGARAM2Q6ZUX3 1019 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 FRMD5Q7Z6J6 570 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 MTERF4Q7Z6M4 381 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 CREBRFQ8IUR6 639 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TRIM59Q8IWR1 403 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TPH2Q8IWU9 490 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 CCDC170Q8IYT3 715 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 ZNF397Q8NF99 534 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 REPS2Q8NFH8 660 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 NLGN2Q8NFZ4 835 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 ZNF592Q92610 1267 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 DYDC2Q96IM9 177 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TRERF1Q96PN7 1200 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TAAR1Q96RJ0 339 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 UIMC1Q96RL1 719 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 REEP2Q9BRK0 252 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TUBB2BQ9BVA1 445 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 BHMT2Q9H2M3 363 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 NDST4Q9H3R1 872 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 UNC45AQ9H3U1 944 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 RPAP3Q9H6T3 665 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 RAVER2Q9HCJ3 691 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 AGO4Q9HCK5 861 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 OLFML3Q9NRN5 406 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 TBC1D22BQ9NU19 505 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 HOXC10Q9NYD6 342 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 RGL1Q9NZL6 768 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 COL20A1Q9P218 1284 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 SEL1LQ9UBV2 794 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 FAM184BQ9ULE4 1060 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 SCAF8Q9UPN6 1271 aaKnown RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 SIK3Q9Y2K2 1263 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 AFG3L2Q9Y4W6 797 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 CTDP1Q9Y5B0 961 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
NEK3-211ENST00000629912 MYPNQ86TC9 1320 aa6.16□□□□□ -1.42
NEK3-211ENST00000629912 MYH11P35749 1972 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 SOWAHDA6NJG2 315 aa6.15□□□□□ -1.42
NEK3-211ENST00000629912 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
NEK3-211ENST00000629912 CALUO43852 315 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms