RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 OTOP1Q7RTM1 612 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 OVCH1Q7RTY7 1134 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 DDX53Q86TM3 631 aaKnown RBP4.5□□□□□ -1.69
CNOT1-223ENST00000628857 OSTM1Q86WC4 334 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 PROSER1Q86XN7 944 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 KIF18BQ86Y91 864 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 FAM26EQ8N5C1 309 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 ZBTB8AQ96BR9 441 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 CLIC6Q96NY7 704 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 KANSL2Q9H9L4 492 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 DLL4Q9NR61 685 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 USP35Q9P2H5 1018 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 CBLCQ9ULV8 474 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 PLAAQ9Y263 795 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 ATP23Q9Y6H3 246 aa4.5□□□□□ -1.69
CNOT1-223ENST00000628857 ESYT3A0FGR9 886 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 TLDC2A0PJX2 215 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 C9orf118A6NHY6 69 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 MAN2B1O00754 1011 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 RAPGEF3O95398 923 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 PTPN1P18031 435 aaKnown RBP4.49□□□□□ -1.69
CNOT1-223ENST00000628857 STAT5AP42229 794 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 SARSP49591 514 aaKnown RBP4.49□□□□□ -1.69
CNOT1-223ENST00000628857 PABPC4Q13310 644 aaKnown RBP eCLIP4.49□□□□□ -1.69
CNOT1-223ENST00000628857 PLEKHG4Q58EX7 1191 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 ZCCHC8Q6NZY4 707 aaKnown RBP4.49□□□□□ -1.69
CNOT1-223ENST00000628857 EP400NLQ6ZTU2 488 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 FGD2Q7Z6J4 655 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 KIAA0907Q7Z7F0 614 aaPredicted RBP4.49□□□□□ -1.69
CNOT1-223ENST00000628857 CARFQ8N187 725 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 DTX3Q8N9I9 347 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 NINJ1Q92982 152 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 FEZ1Q99689 392 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 TMX1Q9H3N1 280 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 SMURF1Q9HCE7 757 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 TBX22Q9Y458 520 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 TELO2Q9Y4R8 837 aa4.49□□□□□ -1.69
CNOT1-223ENST00000628857 ACOT7O00154 380 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 PPP1R12AO14974 1030 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-223ENST00000628857 EIF5BO60841 1220 aaKnown RBP4.48□□□□□ -1.69
CNOT1-223ENST00000628857 RASGRP1O95267 797 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 ASMTLO95671 621 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 SRGAP2CP0DJJ0 459 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 SDHAP31040 664 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 KCNC1P48547 511 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 MECP2P51608 486 aaKnown RBP4.48□□□□□ -1.69
CNOT1-223ENST00000628857 SLURP1P55000 103 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 JAM2P57087 298 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 KIAA2012Q0VF49 1180 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 DBPQ10586 325 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-223ENST00000628857 ZFYVE27Q5T4F4 411 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 BTBD8Q5XKL5 378 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 VASNQ6EMK4 673 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 TTLL10Q6ZVT0 673 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 IGDCC4Q8TDY8 1250 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 ZNF526Q8TF50 670 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-223ENST00000628857 DLG3Q92796 817 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 FANCLQ9NW38 375 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 B3GALT1Q9Y5Z6 326 aa4.48□□□□□ -1.69
CNOT1-223ENST00000628857 SLC12A8A0AV02 714 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 FAM90A27PA6NNH2 459 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 ZNF839A8K0R7 811 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 TRIM13O60858 407 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 CDC45O75419 566 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 DNAJC8O75937 253 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-223ENST00000628857 ZNF28P17035 718 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 IL13P35225 146 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 DNM2P50570 870 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 TMEM177Q53S58 311 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 TAF7LQ5H9L4 462 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 CD276Q5ZPR3 534 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 ABHD17CQ6PCB6 329 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 UBE2R2Q712K3 238 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-223ENST00000628857 CXXC5Q7LFL8 322 aaKnown RBP4.47□□□□□ -1.69
CNOT1-223ENST00000628857 FRMD5Q7Z6J6 570 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 JAZF1Q86VZ6 243 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 NOSTRINQ8IVI9 506 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 C2orf69Q8N8R5 385 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 IGSF22Q8N9C0 903 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 KCNH7Q9NS40 1196 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 WASF3Q9UPY6 502 aa4.47□□□□□ -1.69
CNOT1-223ENST00000628857 MRPL42Q9Y6G3 142 aaKnown RBP4.47□□□□□ -1.69
CNOT1-223ENST00000628857 OPA1O60313 960 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 NOBOXO60393 691 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 MAFO75444 373 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 LTFP02788 710 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 C4BPAP04003 597 aaKnown RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 ZBTB48P10074 688 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 BMP7P18075 431 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 HSD3B2P26439 372 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 PFKPQ01813 784 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 GRIN1Q05586 938 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 CC2D1AQ6P1N0 951 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 ZNF761Q86XN6 746 aaPredicted RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 PTRH1Q86Y79 214 aaKnown RBP4.46□□□□□ -1.7
CNOT1-223ENST00000628857 AHI1Q8N157 1196 aa4.46□□□□□ -1.7
CNOT1-223ENST00000628857 ADAMTS17Q8TE56 1095 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms