RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 ZBTB5O15062 677 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 PLSCR1O15162 318 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 NPHP1O15259 732 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 LZTS3O60299 673 aaPredicted RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 CCNT1O60563 726 aaKnown RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 MUTP22033 750 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 CASP1P29466 404 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 STX17P56962 302 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 CHMP4BP1P59074 171 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 DDR1Q08345 913 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 GRB10Q13322 594 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 TERF2Q15554 542 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 CC2D1AQ6P1N0 951 aaPredicted RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 WDR59Q6PJI9 974 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 TRAF7Q6Q0C0 670 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 SMYD4Q8IYR2 804 aaPredicted RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 CSGALNACT2Q8N6G5 542 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 SLC44A5Q8NCS7 719 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 LARP4BQ92615 738 aaKnown RBP9.44□□□□□ -0.9
CHD2-209ENST00000627185 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 PIGSQ96S52 555 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 ARFGAP3Q9NP61 516 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 GDAQ9Y2T3 454 aa9.44□□□□□ -0.9
CHD2-209ENST00000627185 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 SSU72P8A0A1W2PR75 194 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 UBAP1LF5GYI3 381 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 KRT86O43790 486 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 HLA-DOAP06340 250 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 ANXA13P27216 316 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 SHMT1P34896 483 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 PDE6BP35913 854 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 PMS1P54277 932 aaKnown RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 KCNQ4P56696 695 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 CBX1P83916 185 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 SF3B2Q13435 895 aaKnown RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 MTF1Q14872 753 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 CALCRLQ16602 461 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 MAN2A1Q16706 1144 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 LETM2Q2VYF4 491 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 ZCWPW2Q504Y3 356 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 MIIPQ5JXC2 388 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 ZNF697Q5TEC3 545 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 KRT79Q5XKE5 535 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 TATDN1Q6P1N9 297 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 BTNL9Q6UXG8 535 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 GMCL1P1Q8NEA9 526 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 RASGRP4Q8TDF6 673 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 RAD54LQ92698 747 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 CUL5Q93034 780 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 PKNOX2Q96KN3 472 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 MRGPRX2Q96LB1 330 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 TRIM47Q96LD4 638 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 PRKD2Q9BZL6 878 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 VPS16Q9H269 839 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 JMJD4Q9H9V9 463 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 KCNMB3Q9NPA1 279 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 PSD3Q9NYI0 1048 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 TAB2Q9NYJ8 693 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 LRWD1Q9UFC0 647 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 REXO2Q9Y3B8 237 aaKnown RBP9.43□□□□□ -0.9
CHD2-209ENST00000627185 DAAM1Q9Y4D1 1078 aa9.43□□□□□ -0.9
CHD2-209ENST00000627185 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 RBAK-RBAKDNI3L0D1 243 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 RNF225M0QZC1 329 aaPredicted RBP9.42□□□□□ -0.9
CHD2-209ENST00000627185 PJA2O43164 708 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 ERLIN1O75477 346 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 CIITAP33076 1130 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 CCT6AP40227 531 aaKnown RBP9.42□□□□□ -0.9
CHD2-209ENST00000627185 GOLGA8FQ08AF8 430 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 GOLGA8DPQ0D2H9 430 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 TBC1D8BQ0IIM8 1120 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 STK4Q13043 487 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 EDRF1Q3B7T1 1238 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
CHD2-209ENST00000627185 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 STRIP1Q5VSL9 837 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 ANKRD40Q6AI12 368 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 SLFN12Q8IYM2 578 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 KIAA0895Q8NCT3 520 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 TEKT1Q969V4 418 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 GMCL1Q96IK5 515 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 CNOT6LQ96LI5 555 aaKnown RBP9.42□□□□□ -0.9
CHD2-209ENST00000627185 MXD3Q9BW11 206 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 FUT8Q9BYC5 575 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 PARD6BQ9BYG5 372 aa9.42□□□□□ -0.9
CHD2-209ENST00000627185 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
CHD2-209ENST00000627185 VIPAS39Q9H9C1 493 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms