RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 STYK1Q6J9G0 422 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 SYDE1Q6ZW31 735 aaPredicted RBP4.69□□□□□ -1.66
CDKL5-208ENST00000624953 JAMLQ86YT9 394 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 SIRT2Q8IXJ6 389 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 KCTD13Q8WZ19 329 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 DIO2Q92813 273 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 ZFYVE21Q9BQ24 234 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 IER2Q9BTL4 223 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 OSBPL2Q9H1P3 480 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 PLA2G2DQ9UNK4 145 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 DAPK1P53355 1430 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 KIF1BO60333 1816 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 AFF2P51816 1311 aa4.69□□□□□ -1.66
CDKL5-208ENST00000624953 PPLO60437 1756 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 PNPLA6Q8IY17 1366 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 TRAV20A0A0B4J274 112 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 H7BY64 318 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 AGRPO00253 132 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 MEFVO15553 781 aaPredicted RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 KCNQ2O43526 872 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 MSCO60682 206 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 FAM153BP0C7A2 387 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 LCP1P13796 627 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 GTF2A2P52657 109 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 ZC3H12BQ5HYM0 836 aaKnown RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 ZNF772Q68DY9 489 aaPredicted RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 WWC2Q6AWC2 1192 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 BRINP3Q76B58 766 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 ZNF605Q86T29 641 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 AMIGO3Q86WK7 504 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 LDHDQ86WU2 507 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 MIB1Q86YT6 1006 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 PPIL6Q8IXY8 311 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 TMEFF1Q8IYR6 380 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 LZTR1Q8N653 840 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 DDX17Q92841 729 aaKnown RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 EXOC2Q96KP1 924 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 DRC1Q96MC2 740 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 GULP1Q9UBP9 304 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 RWDD3Q9Y3V2 267 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 TIMM13Q9Y5L4 95 aaPredicted RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 RIMS2Q9UQ26 1411 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 NCOA3Q9Y6Q9 1424 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 NRAPQ86VF7 1730 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 CRYBG1Q9Y4K1 1723 aa4.68□□□□□ -1.66
CDKL5-208ENST00000624953 RPRD2Q5VT52 1461 aaKnown RBP4.68□□□□□ -1.66
CDKL5-208ENST00000624953 IFT172Q9UG01 1749 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 ATRNO75882 1429 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 DCCP43146 1447 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 TSPY4P0CV99 314 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 TSPY10P0CW01 314 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 PDE6BP35913 854 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 EPHB3P54753 998 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 SRSF3P84103 164 aaKnown RBP4.67□□□□□ -1.66
CDKL5-208ENST00000624953 TMEM62Q0P6H9 643 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 RAB3GAP1Q15042 981 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 TRIM61Q5EBN2 209 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 LILRB2Q8N423 598 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 DCAF4Q8WV16 495 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 CPA5Q8WXQ8 436 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 RNF38Q9H0F5 515 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 HSPBP1Q9NZL4 362 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 LRP2BPQ9P2M1 347 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 HCFC2Q9Y5Z7 792 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 EID1Q9Y6B2 187 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 CLTCL1P53675 1640 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 ADGRL2O95490 1459 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 BCL9LQ86UU0 1499 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 NEXMIFQ5QGS0 1516 aa4.67□□□□□ -1.66
CDKL5-208ENST00000624953 RGPD1P0DJD0 1748 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 NWD2Q9ULI1 1742 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 NUDT19A8MXV4 375 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 U2SURPO15042 1029 aaKnown RBP4.66□□□□□ -1.66
CDKL5-208ENST00000624953 SGSM2O43147 1006 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 PRODHO43272 600 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 TADA3O75528 432 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 TACR1P25103 407 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 ECI1P42126 302 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 RAP1GAPP47736 663 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 RPL11P62913 178 aaKnown RBP4.66□□□□□ -1.66
CDKL5-208ENST00000624953 HTRA3P83110 453 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 PRR5P85299 388 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 SLC9A5Q14940 896 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 MTERF2Q49AM1 385 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 C2orf27AQ580R0 203 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 MROH9Q5TGP6 573 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 OLFML2BQ68BL8 750 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 BICRALQ6AI39 1079 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 NSMFQ6X4W1 530 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 SCUBE1Q8IWY4 988 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 GSTCDQ8NEC7 633 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.66□□□□□ -1.66
CDKL5-208ENST00000624953 MZB1Q8WU39 189 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 LNPKQ9C0E8 428 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 SMG5Q9UPR3 1016 aaKnown RBP4.66□□□□□ -1.66
CDKL5-208ENST00000624953 ZNF652Q9Y2D9 606 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 RREB1Q92766 1687 aa4.66□□□□□ -1.66
CDKL5-208ENST00000624953 CAMTA1Q9Y6Y1 1673 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms