RNA–Protein interactions for RNA: ENST00000622233.1

RAB28P4-201, Transcript of RAB28, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB28P4, Length 665 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P4-201ENST00000622233 RIC1Q4ADV7 1423 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 UBN2Q6ZU65 1347 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 SRFP11831 508 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 ITGA4P13612 1032 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 YBX3P16989 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 CD96P40200 585 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 CTSKP43235 329 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 TGFB2P61812 414 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 IFRD2Q12894 506 aaPredicted RBP8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 TCEAL1Q15170 157 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 CPSF6Q16630 551 aaKnown RBP eCLIP8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 TSPYL6Q8N831 410 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 UBE2FQ969M7 185 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 HDAC8Q9BY41 377 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 GBP3Q9H0R5 595 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 MKNK2Q9HBH9 465 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 WHRNQ9P202 907 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 ZMYM5Q9UJ78 669 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 FER1L6Q2WGJ9 1857 aa8.65□□□□□ -1.02
RAB28P4-201ENST00000622233 UTRNP46939 3433 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 CCDC88AQ3V6T2 1871 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 SLX4Q8IY92 1834 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 H0Y8X5 98 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 SIGLEC6O43699 453 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 ITGAVP06756 1048 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 KCNA3P22001 575 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 CLEC16AQ2KHT3 1053 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 PRR5LQ6MZQ0 368 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 CRTC3Q6UUV7 619 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 KIF6Q6ZMV9 814 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 SLC51AQ86UW1 340 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 FIBCD1Q8N539 461 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 LRRN4CLQ8ND94 238 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 ST13P5Q8NFI4 369 aaPredicted RBP8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 ZDHHC15Q96MV8 337 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 GPR62Q9BZJ7 368 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 DBF4Q9UBU7 674 aaPredicted RBP8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 MRPL42Q9Y6G3 142 aaKnown RBP8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 MYH3P11055 1940 aa8.64□□□□□ -1.03
RAB28P4-201ENST00000622233 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 ELL2O00472 640 aaPredicted RBP8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 DPEP1P16444 411 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 BNIP3Q12983 259 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 COPS6Q7L5N1 327 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 ZNF227Q86WZ6 799 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 ZNF34Q8IZ26 560 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 CNBD1Q8NA66 436 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 DSCC1Q9BVC3 393 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 ATP13A1Q9HD20 1204 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 CGGBP1Q9UFW8 167 aaPredicted RBP8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 NIP7Q9Y221 180 aaKnown RBP eCLIP8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
RAB28P4-201ENST00000622233 DICER1Q9UPY3 1922 aaKnown RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 PITPNM2Q9BZ72 1349 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 A0A0G2JLW4 131 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 A0A1W2PQU0 124 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 VAMP4O75379 141 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 PPM1BO75688 479 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 GRIA2P42262 883 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 SSRP1Q08945 709 aaKnown RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 TWISTNBQ3B726 338 aaPredicted RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 NOP9Q86U38 636 aaKnown RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 BVESQ8NE79 360 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 SYTL5Q8TDW5 730 aaPredicted RBP8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 TCTN2Q96GX1 697 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 MYH16Q9H6N6 1097 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 AKT3Q9Y243 479 aa8.62□□□□□ -1.03
RAB28P4-201ENST00000622233 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 NTSR2O95665 410 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 CHRNA5P30532 468 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 SSTR4P31391 388 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 CLCN7P51798 805 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 EXOSC9Q06265 439 aaKnown RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 AIMP1Q12904 312 aaKnown RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 AOC3Q16853 763 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 CCDC30Q5VVM6 783 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 YOD1Q5VVQ6 348 aaPredicted RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 TSPYL5Q86VY4 417 aaPredicted RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 ARHGEF39Q8N4T4 335 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 PLBD2Q8NHP8 589 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 MCMBPQ9BTE3 642 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 SPATA9Q9BWV2 254 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 GPATCH2Q9NW75 528 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 TAF1P21675 1872 aa8.61□□□□□ -1.03
RAB28P4-201ENST00000622233 LRRC37AA6NMS7 1700 aa8.6□□□□□ -1.03
RAB28P4-201ENST00000622233 TIAM2Q8IVF5 1701 aa8.6□□□□□ -1.03
RAB28P4-201ENST00000622233 TMEM265A0A087WTH1 108 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms