RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SPAG1Q07617 926 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 SLC35G1Q2M3R5 365 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 DPCR1Q3MIW9 517 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM43AQ8N2R8 423 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 STRNO43815 780 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF445P59923 1031 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 VPS16Q9H269 839 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 MAGEF1Q9HAY2 307 aa13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 SEPT11Q9NVA2 429 aaKnown RBP13.86□□□□□ -0.19
SCAMP1-207ENST00000621999 USP8P40818 1118 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 RGS2P41220 211 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PSMC5P62195 406 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 SYCP1Q15431 976 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF668Q96K58 619 aaPredicted RBP13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 FAM49AQ9H0Q0 323 aaPredicted RBP13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 IFNKQ9P0W0 207 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 SCN9AQ15858 1988 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 CETN3O15182 167 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 TBC1D8O95759 1140 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 STAT5BP51692 787 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 DMP1Q13316 513 aaPredicted RBP13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PORCNQ9H237 461 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 EXOC3O60645 756 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PHACTR2O75167 634 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 IWS1Q96ST2 819 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 SRRTQ9BXP5 876 aaKnown RBP13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 JADE2Q9NQC1 790 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 FRMD4BQ9Y2L6 1034 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 PCNX4Q63HM2 1172 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 XRRA1Q6P2D8 792 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 SEPT1Q8WYJ6 367 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 C12orf42Q96LP6 360 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 RIT2Q99578 217 aa13.85□□□□□ -0.19
SCAMP1-207ENST00000621999 M0QZ92 97 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 MAFGO15525 162 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 SRGAP2CP0DJJ0 459 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 ALDH5A1P51649 535 aaPredicted RBP13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 UVSSAQ2YD98 709 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 RAD54LQ92698 747 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 CCSER1Q9C0I3 900 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 MAN1B1Q9UKM7 699 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 PPP1R2P41236 205 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 CYP2J2P51589 502 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 IL31RAQ8NI17 732 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 GPRASP2Q96D09 838 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 EXOC7Q9UPT5 735 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 INO80B-WBP1J3KQ70 363 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 KMT5BQ4FZB7 885 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 ANKRD23Q86SG2 305 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 ZNF592Q92610 1267 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 INO80BQ9C086 356 aaPredicted RBP13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
SCAMP1-207ENST00000621999 DNERQ8NFT8 737 aa13.83□□□□□ -0.19
SCAMP1-207ENST00000621999 PARVGQ9HBI0 331 aa13.83□□□□□ -0.19
SCAMP1-207ENST00000621999 TSKSQ9UJT2 592 aa13.83□□□□□ -0.19
SCAMP1-207ENST00000621999 WNT7AO00755 349 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 PEX3P56589 373 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ZBTB8OSQ8IWT0 167 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 SAMD3Q8N6K7 520 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 TRIM6Q9C030 488 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 GDAQ9Y2T3 454 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 AOC2O75106 756 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ZNF397Q8NF99 534 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 NLRP4Q96MN2 994 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 UNC45AQ9H3U1 944 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 KMT5AQ9NQR1 393 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 CALUO43852 315 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ZEB2O60315 1214 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 GH1P01241 217 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 CYP2C19P33261 490 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 UBXN1Q04323 297 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 LY6KQ17RY6 165 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ARMCX2Q7L311 632 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 USP37Q86T82 979 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 GAS2L3Q86XJ1 694 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 TRIML1Q8N9V2 468 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 RGS22Q8NE09 1264 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 CTAGE1Q96RT6 745 aa13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ZNF214Q9UL59 606 aaPredicted RBP13.83□□□□□ -0.2
SCAMP1-207ENST00000621999 ADAMTS3O15072 1205 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 GPR142Q7Z601 462 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 DRC1Q96MC2 740 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 YWHABP31946 246 aaKnown RBP13.82□□□□□ -0.2
SCAMP1-207ENST00000621999 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms