RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CAPN7Q9Y6W3 813 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 LRRC37A3O60309 1634 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 LGALS16A8MUM7 142 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 NCK2O43639 380 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 TADA3O75528 432 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 IL1R1P14778 569 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ASIC2Q16515 512 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 RCSD1Q6JBY9 416 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 APOBEC3HQ6NTF7 200 aaKnown RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 HHIPL2Q6UWX4 724 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 SEPT14Q6ZU15 432 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 FBF1Q8TES7 1133 aa9.95□□□□□ -0.82
GGA3-222ENST00000621217 ZNF668Q96K58 619 aaPredicted RBP9.95□□□□□ -0.82
GGA3-222ENST00000621217 EXOC3O60645 756 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 KRT13P13646 458 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 RCAN1P53805 252 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 MTMR2Q13614 643 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 KCTD19Q17RG1 926 aaPredicted RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 XKR9Q5GH70 373 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 MCTP2Q6DN12 878 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 STXBP4Q6ZWJ1 553 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 EXOC4Q96A65 974 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 CCDC127Q96BQ5 260 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 ADAMTS1Q9UHI8 967 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 DUSP10Q9Y6W6 482 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 ABCB11O95342 1321 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 SLC37A4O43826 429 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 PLEKP08567 350 aaPredicted RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 PLA2G4BP0C869 781 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 VAV2P52735 878 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 RHBDL3P58872 404 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 CFAP58Q5T655 872 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 FAM102BQ5T8I3 360 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 GLG1Q92896 1179 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 NOX5Q96PH1 765 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 PPP1R16BQ96T49 567 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 PACSIN2Q9UNF0 486 aaPredicted RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
GGA3-222ENST00000621217 TLDC2A0PJX2 215 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 ABL1P00519 1130 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 ATP1A1P05023 1023 aaKnown RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 EPB41P11171 864 aaKnown RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 HPDP32754 393 aaPredicted RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 GLT8D2Q9H1C3 349 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 ARMCX3Q9UH62 379 aaPredicted RBP9.94□□□□□ -0.82
GGA3-222ENST00000621217 FAN1Q9Y2M0 1017 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 C5P01031 1676 aa9.94□□□□□ -0.82
GGA3-222ENST00000621217 MYMKA6NI61 221 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 LRRC53A6NM62 1247 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 NOP56O00567 594 aaKnown RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 BUB1BO60566 1050 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 HOXA10P31260 410 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 ERVK-24P63145 666 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MDM2Q00987 491 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 GFPT1Q06210 699 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 ODR4Q5SWX8 454 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 TEX2Q8IWB9 1127 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 ADSSL1Q8N142 457 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MICAL1Q8TDZ2 1067 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 U2AF1L4Q8WU68 220 aaKnown RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 AK8Q96MA6 479 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 PCIF1Q9H4Z3 704 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 RABGAP1Q9Y3P9 1069 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MRFAP1Q9Y605 127 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MAGEA9P43362 315 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 CETN1Q12798 172 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 KCTD16Q68DU8 428 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 CC2D1AQ6P1N0 951 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 FAM178BQ8IXR5 827 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 LMNTD2Q8IXW0 634 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 NT5C3AQ9H0P0 336 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 DEFB129Q9H1M3 183 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 GGA3Q9NZ52 723 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 KCNK3O14649 394 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 KIF11P52732 1056 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 LACTBP83111 547 aaPredicted RBP9.93□□□□□ -0.82
GGA3-222ENST00000621217 DGKZQ13574 1117 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 IL17AQ16552 155 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 STYK1Q6J9G0 422 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 DNAAF5Q86Y56 855 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 NCAPGQ9BPX3 1015 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MYOZ2Q9NPC6 264 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 EMILIN3Q9NT22 766 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 PRR12Q9ULL5 1215 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 LAD1O00515 517 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 LRRN2O75325 713 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 KIF4AO95239 1232 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 IGBP1P78318 339 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 ZBED6P86452 979 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 BIRC3Q13489 604 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 NEDD9Q14511 834 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 WHAMMP3Q1A5X7 153 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 MMS22LQ6ZRQ5 1243 aa9.93□□□□□ -0.82
GGA3-222ENST00000621217 NOA1Q8NC60 698 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms