RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 PHC1P78364 1004 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 SRSF2Q01130 221 aaKnown RBP4.9□□□□□ -1.63
LRRC39-204ENST00000620882 TEKQ02763 1124 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 HLTFQ14527 1009 aaKnown RBP eCLIP4.9□□□□□ -1.63
LRRC39-204ENST00000620882 IQCEQ6IPM2 695 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 HHIPL2Q6UWX4 724 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 RASSF3Q86WH2 238 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 UBE2FQ969M7 185 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 AIFM3Q96NN9 605 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 ZDHHC5Q9C0B5 715 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 C7orf69Q9H7B7 122 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 GTF2IRD1Q9UHL9 959 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 USP25Q9UHP3 1055 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 TUBD1Q9UJT1 453 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 TELO2Q9Y4R8 837 aa4.9□□□□□ -1.63
LRRC39-204ENST00000620882 SLC12A8A0AV02 714 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 RASSF10A6NK89 507 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 SCDO00767 359 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 PMM2O15305 246 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 CFBP00751 764 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 F13BP05160 661 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 GNAT1P11488 350 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 GTF2H3Q13889 308 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 HABP4Q5JVS0 413 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ERAP2Q6P179 960 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 COL23A1Q86Y22 540 aaPredicted RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 SLC35G2Q8TBE7 412 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 E2F7Q96AV8 911 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 TMEM169Q96HH4 297 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ORAI2Q96SN7 254 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ACO2Q99798 780 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 SSBP4Q9BWG4 385 aaPredicted RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 GTPBP4Q9BZE4 634 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ATP13A1Q9HD20 1204 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 DUSP13Q9UII6 198 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 LAS1LQ9Y4W2 734 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 KLHL33A6NCF5 533 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 GNAT3A8MTJ3 354 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 APPP05067 770 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 RPL10P27635 214 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 LTKP29376 864 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 TRAPPC10P48553 1259 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 RPL11P62913 178 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 KRT85P78386 507 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 OS9Q13438 667 aaPredicted RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 SAFB2Q14151 953 aaKnown RBP eCLIP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 KIR3DS1Q14943 382 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 VPS72Q15906 364 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 RRP12Q5JTH9 1297 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 IFIT1BQ5T764 474 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 MORC1Q86VD1 984 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 TMTC2Q8N394 836 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ZNF610Q8N9Z0 462 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 ZBTB34Q8NCN2 500 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 VPS37AQ8NEZ2 397 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 FAM83CQ9BQN1 747 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 DDX21Q9NR30 783 aaKnown RBP eCLIP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 SEMA3GQ9NS98 782 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 NOC2LQ9Y3T9 749 aaKnown RBP4.89□□□□□ -1.63
LRRC39-204ENST00000620882 RWDD3Q9Y3V2 267 aa4.89□□□□□ -1.63
LRRC39-204ENST00000620882 GSTA4O15217 222 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 DHX15O43143 795 aaKnown RBP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 EFEMP2O95967 443 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 ESR1P03372 595 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 IFIT2P09913 472 aaKnown RBP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 RBM10P98175 930 aaKnown RBP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 LLGL1Q15334 1064 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 SAFBQ15424 915 aaKnown RBP eCLIP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 GPR19Q15760 415 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 EFCAB2Q5VUJ9 269 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 FAM43BQ6ZT52 329 aaPredicted RBP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 OTOP3Q7RTS5 596 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 WAPLQ7Z5K2 1190 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 TXNRD3Q86VQ6 643 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 SIRT2Q8IXJ6 389 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 Q8N1Y9 231 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 NAT16Q8N8M0 369 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 PPP1R35Q8TAP8 253 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 PLEKHO2Q8TD55 490 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 PPCSQ9HAB8 311 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 NOP53Q9NZM5 478 aaKnown RBP4.88□□□□□ -1.63
LRRC39-204ENST00000620882 SRPK3Q9UPE1 567 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 B3GALT1Q9Y5Z6 326 aa4.88□□□□□ -1.63
LRRC39-204ENST00000620882 C9orf172C9J069 976 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 C22orf46C9J442 243 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 MYO1BO43795 1136 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 NBPF7P0C2Y1 421 aaPredicted RBP4.87□□□□□ -1.63
LRRC39-204ENST00000620882 SLC5A1P13866 664 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 ECE1P42892 770 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 CHRNA4P43681 627 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 TMEM132BQ14DG7 1078 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 ARHGAP44Q17R89 818 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 CT83Q5H943 113 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 CATSPEREQ5SY80 951 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 SPTY2D1Q68D10 685 aaPredicted RBP4.87□□□□□ -1.63
LRRC39-204ENST00000620882 XRRA1Q6P2D8 792 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 LILRA6Q6PI73 481 aa4.87□□□□□ -1.63
LRRC39-204ENST00000620882 AMOTL1Q8IY63 956 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms