RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 SMIM22K7EJ46 135 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 N4BP1O75113 896 aaKnown RBP13.41□□□□□ -0.26
GTF2I-218ENST00000620879 PDE6CP51160 858 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
GTF2I-218ENST00000620879 UAP1Q16222 522 aaPredicted RBP13.41□□□□□ -0.26
GTF2I-218ENST00000620879 CEP55Q53EZ4 464 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 SWSAP1Q6NVH7 229 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 SND1Q7KZF4 910 aaKnown RBP eCLIP13.41□□□□□ -0.265e-6■■■■□ 23
GTF2I-218ENST00000620879 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
GTF2I-218ENST00000620879 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 TMEM60Q9H2L4 133 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 TTLL3Q9Y4R7 772 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
GTF2I-218ENST00000620879 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 WDR64B1ANS9 1081 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 CAPN2P17655 700 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 HPDP32754 393 aaPredicted RBP13.4□□□□□ -0.26
GTF2I-218ENST00000620879 PRELPP51888 382 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 BAATQ14032 418 aaPredicted RBP13.4□□□□□ -0.26
GTF2I-218ENST00000620879 IQCDQ96DY2 449 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 SERPINA10Q9UK55 444 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 ECE1P42892 770 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 TUBB4BP68371 445 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 MESDQ14696 234 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 PPP1R13BQ96KQ4 1090 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 BCL2L12Q9HB09 334 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 NYAP2Q9P242 653 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
GTF2I-218ENST00000620879 TUBBP07437 444 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 SPOUT1Q5T280 376 aaKnown RBP13.4□□□□□ -0.26
GTF2I-218ENST00000620879 CLEC17AQ6ZS10 378 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 HACE1Q8IYU2 909 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 VCPKMTQ9H867 229 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 KCNK9Q9NPC2 374 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 PNMA3Q9UL41 463 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 NUB1Q9Y5A7 615 aa13.4□□□□□ -0.26
GTF2I-218ENST00000620879 SLC16A4O15374 487 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 TEX33O43247 280 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 P4HA1P13674 534 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 CXCR5P32302 372 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PTK2Q05397 1052 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PPP2R5DQ14738 602 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 LONRF2Q1L5Z9 754 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 RETREG2Q8NC44 543 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 IPO4Q8TEX9 1081 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 NLRP7Q8WX94 980 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 RABEP2Q9H5N1 569 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 UBE2TQ9NPD8 197 aaPredicted RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 CD58P19256 250 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 EIF4A3P38919 411 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 TFDP1Q14186 410 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 SYCE1Q8N0S2 351 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 TMEM206Q9H813 350 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PARP2Q9UGN5 583 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 DDX41Q9UJV9 622 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 FAM184BQ9ULE4 1060 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 DDTLA6NHG4 134 aaPredicted RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 ACTN4O43707 911 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 LRRC63Q05C16 580 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 COASYQ13057 564 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PSMD2Q13200 908 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 HDXQ7Z353 690 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 RAD54LQ92698 747 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 LXNQ9BS40 222 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PCDHB4Q9Y5E5 795 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 NSFP46459 744 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PPM1FP49593 454 aaPredicted RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 CXCL9Q07325 125 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 PPP1R21Q6ZMI0 780 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 RTFDC1Q9BY42 306 aaPredicted RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 NACA2Q9H009 215 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 FBXO40Q9UH90 709 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
GTF2I-218ENST00000620879 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
GTF2I-218ENST00000620879 ABL1P00519 1130 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 QARSP47897 775 aaKnown RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 ZBED6P86452 979 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 COG2Q14746 738 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 NBPF9Q3BBW0 867 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 JPH2Q9BR39 696 aaPredicted RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 TXNDC16Q9P2K2 825 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 SYNJ2BP-COX16A0A087WUM0 186 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 E7EVH7 732 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 STXBP3O00186 592 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 PPP1R18Q6NYC8 613 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 RASGRP2Q7LDG7 609 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
GTF2I-218ENST00000620879 FAM204AQ9H8W3 233 aa13.38□□□□□ -0.27
GTF2I-218ENST00000620879 COX16Q9P0S2 106 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms