RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 ATP23Q9Y6H3 246 aa8.71□□□□□ -1.02
LPCAT3-213ENST00000620843 NUDT19A8MXV4 375 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 F8W031 263 aaPredicted RBP8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 HIP1RO75146 1068 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 LTFP02788 710 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 EXOSC10Q01780 885 aaKnown RBP8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 ADGRF1Q5T601 910 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 COG1Q8WTW3 980 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 PEX11GQ96HA9 241 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 INTS4Q96HW7 963 aaKnown RBP8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 TELO2Q9Y4R8 837 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
LPCAT3-213ENST00000620843 DVL2O14641 736 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 MPOP05164 745 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 TUSC3Q13454 348 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 RAB3GAP1Q15042 981 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 ZNF174Q15697 407 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 MILR1Q7Z6M3 343 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 EFHBQ8N7U6 833 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 KIAA1958Q8N8K9 716 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 PHOSPHO1Q8TCT1 267 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 CEP89Q96ST8 783 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 KLHL42Q9P2K6 505 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 ASH2LQ9UBL3 628 aa8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 OAS3Q9Y6K5 1087 aaKnown RBP8.69□□□□□ -1.02
LPCAT3-213ENST00000620843 TCRBV5S2A0A599 114 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 CLASP2O75122 1294 aaKnown RBP8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 S100BP04271 92 aaPredicted RBP8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 SLC9A1P19634 815 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 KIF11P52732 1056 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 MTMR1Q13613 665 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 NR1I3Q14994 352 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 SEC23AQ15436 765 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 RPTNQ6XPR3 784 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 PCIF1Q9H4Z3 704 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 ZFP64Q9NPA5 681 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 HCFC2Q9Y5Z7 792 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 MROH2BQ7Z745 1585 aa8.68□□□□□ -1.02
LPCAT3-213ENST00000620843 EPHA5P54756 1037 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 CBLL1Q75N03 491 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 HDGFL2Q7Z4V5 671 aaPredicted RBP8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 ATG4DQ86TL0 474 aaPredicted RBP8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 CLEC4DQ8WXI8 215 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 MTMR8Q96EF0 704 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 PUS7LQ9H0K6 701 aaKnown RBP8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 SLC6A17Q9H1V8 727 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 METTL14Q9HCE5 456 aaKnown RBP8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 SPO11Q9Y5K1 396 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 B3GALT1Q9Y5Z6 326 aa8.67□□□□□ -1.02
LPCAT3-213ENST00000620843 FAM90A27PA6NNH2 459 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 TGM5O43548 720 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 PRKD3O94806 890 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 PTPN1P18031 435 aaKnown RBP8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 PDE6BP35913 854 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 PRR5P85299 388 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 ITKQ08881 620 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 BTBD8Q5XKL5 378 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 PASD1Q8IV76 773 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 TRIM48Q8IWZ4 208 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 CNTD1Q8N815 330 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 ARRDC4Q8NCT1 418 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 DLG3Q92796 817 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 SLC5A5Q92911 643 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 ELF4Q99607 663 aaPredicted RBP8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 TRIM8Q9BZR9 551 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 KCNH7Q9NS40 1196 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 TOMM22Q9NS69 142 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 RIC8BQ9NVN3 520 aa8.66□□□□□ -1.02
LPCAT3-213ENST00000620843 OR14I1A6ND48 311 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 BUB1BO60566 1050 aaPredicted RBP8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 ULK1O75385 1050 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 ZBTB7AO95365 584 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 GJA4P35212 333 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 GRIN1Q05586 938 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 TMEM132BQ14DG7 1078 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 DDB1Q16531 1140 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 PLEKHN1Q494U1 663 aaPredicted RBP8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 ODR4Q5SWX8 454 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 ASPSCR1Q9BZE9 553 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 BCAS3Q9H6U6 928 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 KLHL14Q9P2G3 628 aa8.65□□□□□ -1.02
LPCAT3-213ENST00000620843 WDR62O43379 1518 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 MAPKAPK2P49137 400 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 SLC9A5Q14940 896 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 KCNMB1Q16558 191 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 TSPAN17Q96FV3 270 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 SCYL1Q96KG9 808 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 SMAD5Q99717 465 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 VTA1Q9NP79 307 aa8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 G3BP2Q9UN86 482 aaKnown RBP8.64□□□□□ -1.03
LPCAT3-213ENST00000620843 PRAMEF25A6NGN4 478 aa8.63□□□□□ -1.03
LPCAT3-213ENST00000620843 C4BPAP04003 597 aaKnown RBP8.63□□□□□ -1.03
LPCAT3-213ENST00000620843 GLI1P08151 1106 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms