RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 ACTR2P61160 394 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 MFSD10Q14728 455 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 KIAA0753Q2KHM9 967 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 PPP4R3AQ6IN85 833 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 POTEDQ86YR6 584 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 SEPT1Q8WYJ6 367 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 SLC5A5Q92911 643 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 TRIM43Q96BQ3 446 aaPredicted RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 CTAGE1Q96RT6 745 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 TRPV6Q9H1D0 765 aa12.24□□□□□ -0.45
TARDBP-223ENST00000620632 FOXP1Q9H334 677 aaPredicted RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 TRMT13Q9NUP7 481 aaKnown RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 DDX25Q9UHL0 483 aaKnown RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 RANBP2P49792 3224 aaKnown RBP12.24□□□□□ -0.45
TARDBP-223ENST00000620632 SIP14410 1827 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 H3BRB1 525 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 LGR5O75473 907 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 PSMD10O75832 226 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 ATG7O95352 703 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 CLTBP09497 229 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 U2AF2P26368 475 aaKnown RBP eCLIP12.23□□□□□ -0.453e-10■□□□□ 10
TARDBP-223ENST00000620632 SAFBQ15424 915 aaKnown RBP eCLIP12.23□□□□□ -0.45
TARDBP-223ENST00000620632 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
TARDBP-223ENST00000620632 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 B3GNT9Q6UX72 402 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 SESTD1Q86VW0 696 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 HAS1Q92839 578 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 TOX2Q96NM4 488 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 RNPEPQ9H4A4 650 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 TUT1Q9H6E5 874 aaKnown RBP12.23□□□□□ -0.45
TARDBP-223ENST00000620632 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 PRDM5Q9NQX1 630 aaPredicted RBP12.23□□□□□ -0.45
TARDBP-223ENST00000620632 HDAC6Q9UBN7 1215 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 TBX21Q9UL17 535 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 EVPLQ92817 2033 aa12.23□□□□□ -0.45
TARDBP-223ENST00000620632 UMODL1Q5DID0 1318 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 EMSYQ7Z589 1322 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 LOXHD1Q8IVV2 1947 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 IGKV6D-21A0A0A0MT36 114 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 MARK3P27448 753 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 TOB1P50616 345 aaPredicted RBP12.22□□□□□ -0.45
TARDBP-223ENST00000620632 ZNF200P98182 395 aaPredicted RBP12.22□□□□□ -0.45
TARDBP-223ENST00000620632 NBR1Q14596 966 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 LRCH2Q5VUJ6 765 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 ABHD15Q6UXT9 468 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 NOSTRINQ8IVI9 506 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 CCDC60Q8IWA6 550 aaPredicted RBP12.22□□□□□ -0.45
TARDBP-223ENST00000620632 INTS4Q96HW7 963 aaKnown RBP12.22□□□□□ -0.45
TARDBP-223ENST00000620632 KATNAL1Q9BW62 490 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 TMEM60Q9H2L4 133 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 UNC45AQ9H3U1 944 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 TBC1D22BQ9NU19 505 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 GTF2IRD1Q9UHL9 959 aa12.22□□□□□ -0.45
TARDBP-223ENST00000620632 DCDC2CA8MYV0 355 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 KIAA0355O15063 1070 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 CHMP2AO43633 222 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 CYP2C9P11712 490 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.45
TARDBP-223ENST00000620632 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 ATP4AP20648 1035 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 HOXC8P31273 242 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 LARP1BQ659C4 914 aaKnown RBP12.21□□□□□ -0.45
TARDBP-223ENST00000620632 ZNF746Q6NUN9 644 aaPredicted RBP12.21□□□□□ -0.45
TARDBP-223ENST00000620632 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 TET1Q8NFU7 2136 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 DHX38Q92620 1227 aaKnown RBP12.21□□□□□ -0.45
TARDBP-223ENST00000620632 WNT8BQ93098 351 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 RIT2Q99578 217 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 TEKT3Q9BXF9 490 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 VAV3Q9UKW4 847 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 NR2E3Q9Y5X4 410 aa12.21□□□□□ -0.45
TARDBP-223ENST00000620632 ARID2Q68CP9 1835 aa12.21□□□□□ -0.46
TARDBP-223ENST00000620632 EML1O00423 815 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 GAS7O60861 476 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 MDM2Q00987 491 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-223ENST00000620632 KRT76Q01546 638 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 PTPN11Q06124 597 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-223ENST00000620632 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 UGCGQ16739 394 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 PRPF38BQ5VTL8 546 aaKnown RBP12.2□□□□□ -0.46
TARDBP-223ENST00000620632 MCTP1Q6DN14 999 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 MTMR9Q96QG7 549 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 TMEM39AQ9NV64 488 aa12.2□□□□□ -0.46
TARDBP-223ENST00000620632 LAMA2P24043 3122 aaKnown RBP12.2□□□□□ -0.46
TARDBP-223ENST00000620632 IGSF9BQ9UPX0 1349 aa12.19□□□□□ -0.46
TARDBP-223ENST00000620632 LAMA3Q16787 3333 aa12.19□□□□□ -0.46
TARDBP-223ENST00000620632 H3BQV1 296 aa12.19□□□□□ -0.46
TARDBP-223ENST00000620632 TBX3O15119 743 aa12.19□□□□□ -0.46
TARDBP-223ENST00000620632 TLR3O15455 904 aaKnown RBP12.19□□□□□ -0.46
TARDBP-223ENST00000620632 NEMFO60524 1076 aa12.19□□□□□ -0.46
TARDBP-223ENST00000620632 SYT1P21579 422 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms