RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TARSL2A2RTX5 802 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 RPS6KA5O75582 802 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 EGFRP00533 1210 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 TFRCP02786 760 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 PDHBP11177 359 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 CD44P16070 742 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 EEF1GP26641 437 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 ERVK-24P63145 666 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 DPYDQ12882 1025 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 ZYXQ15942 572 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 PFKFB3Q16875 520 aaPredicted RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 TDRD12Q587J7 1177 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 PIGSQ96S52 555 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 RNF181Q9P0P0 153 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 HERC5Q9UII4 1024 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 FAM184BQ9ULE4 1060 aa7.71□□□□□ -1.17
SRGAP3-213ENST00000618999 A0A0U1RQJ8 604 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 ATP1A1P05023 1023 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 OSBPP22059 807 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 DNA2P51530 1060 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 CUL4BQ13620 913 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 TMEM164Q5U3C3 297 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 C8orf74Q6P047 294 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 MMS22LQ6ZRQ5 1243 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 ATRIPQ8WXE1 791 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 CDK5RAP3Q96JB5 506 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 MYCBPQ99417 103 aaPredicted RBP7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 CHP1Q99653 195 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 NOC4LQ9BVI4 516 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 HPCAL4Q9UM19 191 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 QSER1Q2KHR3 1735 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 TTC26A0AVF1 554 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 FGFR1OPO95684 399 aaKnown RBP7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 GPR162Q16538 588 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 ASPRV1Q53RT3 343 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 CFAP58Q5T655 872 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 TTBK2Q6IQ55 1244 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 FOXR1Q6PIV2 292 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 CDAN1Q8IWY9 1227 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 SPICE1Q8N0Z3 855 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 MB21D1Q8N884 522 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 MMS19Q96T76 1030 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 TRIM10Q9UDY6 481 aa7.71□□□□□ -1.18
SRGAP3-213ENST00000618999 ANO9A1A5B4 782 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PPP1R3GB7ZBB8 358 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 CYTH3O43739 400 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 ASIC1P78348 528 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 AMPD3Q01432 767 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 C2orf54Q08AI8 447 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 GSPT2Q8IYD1 628 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 GIMAP7Q8NHV1 300 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PLIN2Q99541 437 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 IFIH1Q9BYX4 1025 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 NID2Q14112 1375 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 ZNF541Q9H0D2 1346 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 MOXD2PA6NHM9 499 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 LGALS16A8MUM7 142 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 F5H6K3 240 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 H3BRB1 525 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 KLRC3Q07444 240 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 SEMA3FQ13275 785 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PRAMEF18Q5VWM3 479 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 TRAPPC11Q7Z392 1133 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 MAATS1Q7Z4T9 603 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 CCDC170Q8IYT3 715 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 RASGRP4Q8TDF6 673 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 RIN2Q8WYP3 895 aaPredicted RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 TAF4BQ92750 862 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PSMB7Q99436 277 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 TUT1Q9H6E5 874 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 MMRN2Q9H8L6 949 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 GDAQ9Y2T3 454 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 FAM205CA6NFA0 338 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 B4DLN1 442 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 FZD9O00144 591 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 TCP1P17987 556 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 EPS15P42566 896 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 TRAPPC10P48553 1259 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PRELPP51888 382 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 ODF2Q5BJF6 829 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 GPATCH4Q5T3I0 446 aaKnown RBP7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 FAM83AQ86UY5 434 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 BLIDQ8IZY5 108 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 PHF20Q9BVI0 1012 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 KLHL42Q9P2K6 505 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 HACL1Q9UJ83 578 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 FAM169AQ9Y6X4 670 aa7.7□□□□□ -1.18
SRGAP3-213ENST00000618999 ASTN2O75129 1339 aaPredicted RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 LTBP3Q9NS15 1303 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 SMCO2A6NFE2 343 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 LONP1P36776 959 aaKnown RBP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 EPHB4P54760 987 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 ZNF543Q08ER8 600 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 HLTFQ14527 1009 aaKnown RBP eCLIP7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 FKBP1CQ5VVH2 108 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 MCTP2Q6DN12 878 aa7.69□□□□□ -1.18
SRGAP3-213ENST00000618999 TATDN1Q6P1N9 297 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms