RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 COA7Q96BR5 231 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 CCDC138Q96M89 665 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ZNF189O75820 626 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 KCNJ6P48051 423 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SCG3Q8WXD2 468 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 IQANK1A0A1B0GTG1 560 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ESYT2A0FGR8 921 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 I3L4J1 428 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PIAS1O75925 651 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 POLR2EP19388 210 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 CD151P48509 253 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 C16orf87Q6PH81 154 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 USP17L2Q6R6M4 530 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ARHGAP27Q6ZUM4 889 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 NEK10Q6ZWH5 1172 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PCGF5Q86SE9 256 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 DUSP9Q99956 384 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 PITPNM3Q9BZ71 974 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 CNNM2Q9H8M5 875 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 DDX25Q9UHL0 483 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 AP4S1Q9Y587 144 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ZSCAN5CA6NGD5 496 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 SNX1Q13596 522 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.33□□□□□ -1.88
NEB-220ENST00000618972 SIX6OS1Q8N1H7 587 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ENOX1Q8TC92 643 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 SPATA17Q96L03 361 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 CSRNP1Q96S65 589 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PACSIN1Q9BY11 444 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 POLE2P56282 527 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 NUP107P57740 925 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MYL5Q02045 173 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MKRN3Q13064 507 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 SUZ12Q15022 739 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 TXNRD3Q86VQ6 643 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ASCC2Q9H1I8 757 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 LRWD1Q9UFC0 647 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 LIN7AO14910 233 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 TMEM130Q8N3G9 435 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 LCORLQ8N3X6 602 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 RASSF5Q8WWW0 418 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 R3HDM2Q9Y2K5 976 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 KLC1Q07866 573 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PARP9Q8IXQ6 854 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 QKIQ96PU8 341 aaKnown RBP eCLIP3.33□□□□□ -1.88
NEB-220ENST00000618972 EPB41L5Q9HCM4 733 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ALG13Q9NP73 1137 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 ANGEL1Q9UNK9 670 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 TRAF3IP3Q9Y228 551 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PECAM1P16284 738 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 CCDC124Q96CT7 223 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 CNGB3Q9NQW8 809 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SERPINH1P50454 418 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 USP14P54578 494 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ASPHQ12797 758 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 QPCTQ16769 361 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 CRELD2Q6UXH1 353 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 PPCSQ9HAB8 311 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PKD2L1Q9P0L9 805 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SKAP2O75563 359 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 GSCP56915 257 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 ATG16L1Q676U5 607 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 PPP4R1Q8TF05 950 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SYMPKQ92797 1274 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 ZNF653Q96CK0 615 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 LRGUKQ96M69 825 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 FAM118BQ9BPY3 351 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 STMN3Q9NZ72 180 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 A0A1W2PQ27 194 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 A0A1W2PQ64 194 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 A0A1W2PQD8 194 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 DYTNA2CJ06 578 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MYO1CO00159 1063 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 KRT16P08779 473 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 TNFAIP3P21580 790 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 AP2B1P63010 937 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 INTS9Q9NV88 658 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 PNMA8CA0A1B0GUJ8 204 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 TRPA1O75762 1119 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 RPN1P04843 607 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 MYBL1P10243 752 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 HOXB6P17509 224 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 TMEM139Q8IV31 216 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SCYL3Q8IZE3 742 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 SAMD3Q8N6K7 520 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MGARPQ8TDB4 240 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 THAP11Q96EK4 314 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ADD3Q9UEY8 706 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 ZNF76P36508 570 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 KIF11P52732 1056 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 BPIFB4P59827 614 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 ZNF211Q13398 564 aaPredicted RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 RBM43Q6ZSC3 357 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 LRRC43Q8N309 656 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 FOXP3Q9BZS1 431 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 STK38LQ9Y2H1 464 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 NOC2LQ9Y3T9 749 aaKnown RBP3.33□□□□□ -1.88
NEB-220ENST00000618972 MAD1L1Q9Y6D9 718 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 MYMKA6NI61 221 aa3.33□□□□□ -1.88
NEB-220ENST00000618972 E9PMD0 336 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms