RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 TTC1Q99614 292 aa8.01□□□□□ -1.13
PDE6A-205ENST00000617647 DNAJC17Q9NVM6 304 aaKnown RBP8.01□□□□□ -1.13
PDE6A-205ENST00000617647 THEGQ9P2T0 379 aa8.01□□□□□ -1.13
PDE6A-205ENST00000617647 RABL2AQ9UBK7 228 aaPredicted RBP8.01□□□□□ -1.13
PDE6A-205ENST00000617647 PPLO60437 1756 aa8.01□□□□□ -1.13
PDE6A-205ENST00000617647 ARHGEF40Q8TER5 1519 aa8.01□□□□□ -1.13
PDE6A-205ENST00000617647 CAPN9O14815 690 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 TAF5LO75529 589 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 TARSP26639 723 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 PLTPP55058 493 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 CDR2Q01850 454 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 BTKQ06187 659 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 RESP18Q5W5W9 173 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ANO5Q75V66 913 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 SCUBE1Q8IWY4 988 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 NBPF15Q8N660 670 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
PDE6A-205ENST00000617647 SCG3Q8WXD2 468 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 ERP27Q96DN0 273 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 LACRTQ9GZZ8 138 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ZMYND12Q9H0C1 365 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 EXOC1Q9NV70 894 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 EURLQ9NYK6 297 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PASKQ96RG2 1323 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 SETD1BQ9UPS6 1966 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 PI4KAP2A4QPH2 592 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PALM3A6NDB9 673 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 TRIM75PA6NK02 468 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 H7C1W4 665 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ZNF213O14771 459 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 MAPK13O15264 365 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ASAP2O43150 1006 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 TRPA1O75762 1119 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 FUT4P22083 530 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 TUFMP49411 452 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 DNM2P50570 870 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PTF1AQ7RTS3 328 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PI4KAP1Q8N8J0 262 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 NCOA7Q8NI08 942 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ZNF274Q96GC6 653 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 USP44Q9H0E7 712 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ETNK2Q9NVF9 386 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 CYP39A1Q9NYL5 469 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 LNPEPQ9UIQ6 1025 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 HAO1Q9UJM8 370 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 FBXO9Q9UK97 447 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 DAPK3O43293 454 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 LCA5LO95447 670 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 EIF4A3P38919 411 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 TUBP50607 506 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ITGA7Q13683 1181 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 LRRC36Q1X8D7 754 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 RIBC1Q8N443 379 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 UIMC1Q96RL1 719 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 CCDC77Q9BR77 488 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 DCLRE1BQ9H816 532 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 CLIC5Q9NZA1 410 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PNMA3Q9UL41 463 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 PACSIN2Q9UNF0 486 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 TDRKHQ9Y2W6 561 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 SCINQ9Y6U3 715 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 ITIH6Q6UXX5 1313 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 HECW2Q9P2P5 1572 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 E7ENQ6 273 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 RASGRF2O14827 1237 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 GYG2O15488 501 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 KDM1AO60341 852 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 SHBGP04278 402 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 BYSLQ13895 437 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 CNPY1Q3B7I2 92 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 SLC9C1Q4G0N8 1177 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 C6orf183Q5T699 404 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 IQCKQ8N0W5 287 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 CUEDC2Q9H467 287 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 C14orf93Q9H972 538 aaKnown RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 CABP5Q9NP86 173 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 GPHNQ9NQX3 736 aaPredicted RBP8□□□□□ -1.13
PDE6A-205ENST00000617647 VPS54Q9P1Q0 977 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 DKK3Q9UBP4 350 aa8□□□□□ -1.13
PDE6A-205ENST00000617647 POGZQ7Z3K3 1410 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 FAM170AA1A519 330 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 IQCA1LA6NCM1 817 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 SFI1A8K8P3 1242 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 E7EWF7 191 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 CASQ2O14958 399 aaPredicted RBP7.99□□□□□ -1.13
PDE6A-205ENST00000617647 MCF2LO15068 1137 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 RAD51CO43502 376 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 KIF11P52732 1056 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 ITIH3Q06033 890 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 ZNF844Q08AG5 666 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 TCP11X2Q5H9J9 407 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 C6orf118Q5T5N4 469 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 TMEM53Q6P2H8 277 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 TGS1Q96RS0 853 aaKnown RBP7.99□□□□□ -1.13
PDE6A-205ENST00000617647 TCP11L1Q9NUJ3 509 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 TRAF3IP3Q9Y228 551 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 NUB1Q9Y5A7 615 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 SLC12A7Q9Y666 1083 aa7.99□□□□□ -1.13
PDE6A-205ENST00000617647 ARHGAP10A1A4S6 786 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms