RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 HPDP32754 393 aaPredicted RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 NF2P35240 595 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 EIF3BP55884 814 aaKnown RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
GPN1-212ENST00000616939 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 LRRC57Q8N9N7 239 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 TLCD1Q96CP7 247 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.07■□□□□ 0.32
GPN1-212ENST00000616939 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 NENFQ9UMX5 172 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
GPN1-212ENST00000616939 A0A087X0T9 212 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 A0A0A6YYK5 440 aaPredicted RBP17.06■□□□□ 0.32
GPN1-212ENST00000616939 SMCO2A6NFE2 343 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 GSTA1P08263 222 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 FAM228BP0C875 321 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 SCTRP47872 440 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
GPN1-212ENST00000616939 ATP2B2Q01814 1243 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 KLHL30Q0D2K2 578 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 TRADDQ15628 312 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 KLHL7Q8IXQ5 586 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 RAPGEF5Q92565 580 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 SUFUQ9UMX1 484 aa17.06■□□□□ 0.32
GPN1-212ENST00000616939 DRD4P21917 467 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 CALCRLQ16602 461 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 SOGA3Q5TF21 947 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 GKAP1Q5VSY0 366 aaPredicted RBP17.05■□□□□ 0.32
GPN1-212ENST00000616939 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 TBCKQ8TEA7 893 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 FBXL5Q9UKA1 691 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 INTUQ9ULD6 942 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
GPN1-212ENST00000616939 DNM1LO00429 736 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 KCNK3O14649 394 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 MGRN1O60291 552 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 NPEPPSP55786 919 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 COASYQ13057 564 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 RAPGEF1Q13905 1077 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 QPCTQ16769 361 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 TMC3Q7Z5M5 1100 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 CCT6BQ92526 530 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 DDX12PQ92771 950 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 DNAJC19Q96DA6 116 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 TMEM47Q9BQJ4 181 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 SUCLA2Q9P2R7 463 aaPredicted RBP17.05■□□□□ 0.32
GPN1-212ENST00000616939 TTC7AQ9ULT0 858 aaPredicted RBP17.05■□□□□ 0.32
GPN1-212ENST00000616939 TPX2Q9ULW0 747 aaKnown RBP17.05■□□□□ 0.32
GPN1-212ENST00000616939 MINPP1Q9UNW1 487 aa17.05■□□□□ 0.32
GPN1-212ENST00000616939 KLRF2D3W0D1 207 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 PRKCIP41743 596 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 SPTY2D1Q68D10 685 aaPredicted RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 REXO1Q8N1G1 1221 aaKnown RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 CCDC26Q8TAB7 109 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 NEUROG2Q9H2A3 272 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 POLD4Q9HCU8 107 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 CNOT8Q9UFF9 292 aaKnown RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 NIP7Q9Y221 180 aaKnown RBP eCLIP17.04■□□□□ 0.32
GPN1-212ENST00000616939 STXBP5LQ9Y2K9 1186 aa17.04■□□□□ 0.32
GPN1-212ENST00000616939 NOC2LQ9Y3T9 749 aaKnown RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 COL5A3P25940 1745 aaPredicted RBP17.04■□□□□ 0.32
GPN1-212ENST00000616939 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 F8VZ95 297 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 TRAF5O00463 557 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 SART1O43290 800 aaKnown RBP17.03■□□□□ 0.32
GPN1-212ENST00000616939 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
GPN1-212ENST00000616939 PPP2R5EQ16537 467 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 FAM26FQ5R3K3 315 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 HYIQ5T013 277 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 KRT79Q5XKE5 535 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 DYMQ7RTS9 669 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 FAM228AQ86W67 206 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 PSMD1Q99460 953 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 PACSIN1Q9BY11 444 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 TXLNGYQ9BZA5 131 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 FAM129AQ9BZQ8 928 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
GPN1-212ENST00000616939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.03■□□□□ 0.32
GPN1-212ENST00000616939 COL14A1Q05707 1796 aaKnown RBP17.03■□□□□ 0.32
GPN1-212ENST00000616939 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 CEP104O60308 925 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 TSPY3P0CV98 308 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 TSPY8P0CW00 308 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 TXKP42681 527 aa17.03■□□□□ 0.32
GPN1-212ENST00000616939 ITIH4Q14624 930 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms