RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 RIN2Q8WYP3 895 aaPredicted RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MASTLQ96GX5 879 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 KRT12Q99456 494 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 DUSP9Q99956 384 aaKnown RBP6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 STK32BQ9NY57 414 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 MAD2L2Q9UI95 211 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 STK24Q9Y6E0 443 aa6.17□□□□□ -1.42
SYNCRIP-204ENST00000616122 A0A087X0T9 212 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 ATP2C2O75185 946 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 ASNSP08243 561 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 FAM228BP0C875 321 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 EPHB4P54760 987 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 EDRF1Q3B7T1 1238 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPP4R3CPQ6ZMV5 832 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 ADAT2Q7Z6V5 191 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 ZNF526Q8TF50 670 aaPredicted RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 TNFRSF25Q93038 417 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 BLOC1S4Q9NUP1 217 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 CAPN6Q9Y6Q1 641 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GOLGA6L7A0A1B0GV03 622 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SMIM23A6NLE4 172 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PSMD14O00487 310 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PLEKP08567 350 aaPredicted RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 MNAT1P51948 309 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SNAP25P60880 206 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 HHIPL2Q6UWX4 724 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 CABS1Q96KC9 395 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.16□□□□□ -1.422e-6■■■■■ 154.6
SYNCRIP-204ENST00000616122 PGRMC1O00264 195 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SART1O43290 800 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SLC37A4O43826 429 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SLURP2P0DP57 97 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 FERP16591 822 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 KLRC1P26715 233 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 MXI1P50539 228 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SLC7A5Q01650 507 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCDC93Q567U6 631 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPP1R18Q6NYC8 613 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 CDC42EP5Q6NZY7 148 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 MICALCLQ6ZW33 695 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SUPT20HQ8NEM7 779 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GOLGA5Q8TBA6 731 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 DPH5Q9H2P9 285 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 ARHGAP20Q9P2F6 1191 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 NR3C1P04150 777 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 HARSP12081 509 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 STAT3P40763 770 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GRB10Q13322 594 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 CTTNQ14247 550 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SYDE2Q5VT97 1194 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPP4R3AQ6IN85 833 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 DNAJC7Q99615 494 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 TESPA1A2RU30 521 aaPredicted RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GFPT2O94808 682 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 KNOP1Q1ED39 458 aaKnown RBP6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 XKR9Q5GH70 373 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GLYCTKQ8IVS8 523 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SYCE1Q8N0S2 351 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 FNBP1Q96RU3 617 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 PNKPQ96T60 521 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SH2D3AQ9BRG2 576 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 KCND1Q9NSA2 647 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 GCNT4Q9P109 453 aa6.16□□□□□ -1.42
SYNCRIP-204ENST00000616122 SERPING1P05155 500 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TRIM49P0CI25 452 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TRIM49CP0CI26 452 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CYP11B2P19099 503 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 EIF2AK2P19525 551 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 SLC9A1P19634 815 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CTNNA2P26232 953 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 RPA1P27694 616 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CTNNA1P35221 906 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 STAT2P52630 851 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 GNGT1P63211 74 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 GFPT1Q06210 699 aaPredicted RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TNFAIP1Q13829 316 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 PPP2R5EQ16537 467 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 MIGA2Q7L4E1 593 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 RSRC2Q7L4I2 434 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 KCNK18Q7Z418 384 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 MICALL1Q8N3F8 863 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 UBLCP1Q8WVY7 318 aaPredicted RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 DDX47Q9H0S4 455 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CEP72Q9P209 647 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCPG1Q9ULG6 757 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TMEM110-MUSTN1A8MSY1 372 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 KLRC4O43908 158 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.422e-16■□□□□ 10.5
SYNCRIP-204ENST00000616122 CYP2C19P33261 490 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 PSMC2P35998 433 aaKnown RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 ARHGAP25P42331 645 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 FXR2P51116 673 aaKnown RBP eCLIP6.15□□□□□ -1.423e-9■■■■□ 24.3
SYNCRIP-204ENST00000616122 SLC18A3Q16572 532 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 TBC1D10BQ4KMP7 808 aaPredicted RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 BBXQ8WY36 941 aaPredicted RBP6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 OSBPL9Q96SU4 736 aa6.15□□□□□ -1.42
SYNCRIP-204ENST00000616122 CCDC77Q9BR77 488 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms