RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 FBXO31Q5XUX0 539 aaPredicted RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 TYW1BQ6NUM6 668 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 ERAP2Q6P179 960 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 ZNF577Q9BSK1 485 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 ATP6V0A4Q9HBG4 840 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 FAM207AQ9NSI2 230 aaPredicted RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 FGFR1OP2Q9NVK5 253 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 SEL1LQ9UBV2 794 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 CSE1LP55060 971 aaKnown RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 MYL7Q01449 175 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 FAM47AQ5JRC9 791 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 ZNF438Q7Z4V0 828 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 CEP170P1Q96L14 293 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 SYNCRIPO60506 623 aaKnown RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 MFAP3P55082 362 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 MTERF2Q49AM1 385 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 CCDC84Q86UT8 332 aaPredicted RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 FOXP3Q9BZS1 431 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 HOMER3Q9NSC5 361 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 PANK4Q9NVE7 773 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 PPIEQ9UNP9 301 aaKnown RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 PPEF1O14829 653 aaPredicted RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 SERPINB2P05120 415 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 EHHADHQ08426 723 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 MYO1FO00160 1098 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 P4HA2O15460 535 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 RALAP11233 206 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 PPP3CCP48454 512 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 RBBP7Q16576 425 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 NT5C1BQ96P26 610 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 IBTKQ9P2D0 1353 aaPredicted RBP13.58□□□□□ -0.23
TCF4-248ENST00000616053 TAF1BQ53T94 588 aaPredicted RBP13.58□□□□□ -0.23
TCF4-248ENST00000616053 LRCH2Q5VUJ6 765 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 SKA1Q96BD8 255 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 USP26Q9BXU7 913 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 IDI1Q13907 227 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 SLFN13Q68D06 897 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 PKNOX2Q96KN3 472 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 SLC25A13Q9UJS0 675 aa13.58□□□□□ -0.23
TCF4-248ENST00000616053 KRIT1O00522 736 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 ACADMP11310 421 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 NCF2P19878 526 aaPredicted RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 PDXDC2PQ6P474 469 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 C11orf96Q7Z7L8 435 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 AKT1P31749 480 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 PMS1P54277 932 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 SPATA18Q8TC71 538 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 H2AFY2Q9P0M6 372 aaPredicted RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 KRT39Q6A163 491 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 RNASE11Q8TAA1 199 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 TOPORSQ9NS56 1045 aaPredicted RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 DTNAQ9Y4J8 743 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 HUS1O60921 280 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 BASP1P80723 227 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 MYL5Q02045 173 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 TPX2Q9ULW0 747 aaKnown RBP13.58□□□□□ -0.24
TCF4-248ENST00000616053 IGFBP4P22692 258 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 CDO1Q16878 200 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 ALFQ53S48 1182 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 TRIM69Q86WT6 500 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 AMNQ9BXJ7 453 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 BCL2L14Q9BZR8 327 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 MID2Q9UJV3 735 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 GTF2A1LQ9UNN4 478 aa13.58□□□□□ -0.24
TCF4-248ENST00000616053 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 MAN1A2O60476 641 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 MAP3K10Q02779 954 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 PTPROQ16827 1216 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 LONRF3Q496Y0 759 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 TJP2Q9UDY2 1190 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 NELFBQ8WX92 580 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ARMCX3Q9UH62 379 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 SCINQ9Y6U3 715 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CD109Q6YHK3 1445 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CAND2O75155 1236 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 SYT10Q6XYQ8 523 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 MYOCDQ8IZQ8 938 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ACTR5Q9H9F9 607 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 LRRIQ3A6PVS8 624 aaPredicted RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 DIAPH2O60879 1101 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 ABCD1P33897 745 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 CARSP49589 748 aaKnown RBP13.57□□□□□ -0.24
TCF4-248ENST00000616053 NR1H3Q13133 447 aa13.57□□□□□ -0.24
TCF4-248ENST00000616053 SH3TC2Q8TF17 1288 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms